Factsheet for VIT_01s0011g04670.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 4
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35792	Soybean	plasma membrane	79.84	80.28
KRG90976	Soybean	plasma membrane	78.19	79.72
Solyc05g008350.2.1	Tomato	nucleus, plastid	75.17	77.18
PGSC0003DMT400078356	Potato	extracellular, plasma membrane, vacuole	75.86	76.49
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	75.99	76.1
CDY37372	Canola	cytosol, peroxisome, plasma membrane	76.13	75.72
CDY40385	Canola	cytosol, peroxisome, plasma membrane	76.27	75.44
GSMUA_Achr10P...	Banana	plasma membrane	69.27	75.37
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.99	75.17
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	65.98	72.44
TraesCS3D01G019000.1	Wheat	golgi	65.84	72.07
Os01t0121700-01	Rice	plasma membrane	65.98	72.01
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	65.57	71.99
TraesCS3A01G026500.1	Wheat	extracellular, plasma membrane, vacuole	65.29	71.47
HORVU3Hr1G005830.3	Barley	cytosol	36.76	70.9
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	66.8	70.07
HORVU3Hr1G005770.1	Barley	endoplasmic reticulum	32.78	62.57
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.38	27.37
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.18	27.13
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.42	26.81
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	21.12	25.97
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.18	25.72
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	21.4	25.45
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.95	25.2
VIT_17s0000g02200.t01	Wine grape	cytosol	23.46	24.26
VIT_08s0032g00790.t01	Wine grape	plastid	24.83	24.2
VIT_16s0050g01620.t01	Wine grape	cytosol	19.62	23.95
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.87	23.29
VIT_19s0015g00960.t01	Wine grape	peroxisome	21.81	23.18
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.62	22.81
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.91	22.69
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.63	21.26

Protein Annotations

EntrezGene:100264613	wikigene:100264613	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CBI26926	ProteinID:CBI26926.3	UniProt:D7T8V5	EMBL:FN595752
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
EMBL:KX254201	EntrezGene:LOC100264613	wikigene:LOC100264613	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF262	SMART:SM00382	SUPFAM:SSF52540
TIGR:TC51955	TMHMM:TMhelix	UniParc:UPI0001BE2989	ArrayExpress:VIT_01s0011g04670	EnsemblPlantsGene:VIT_01s0011g04670	EnsemblPlants:VIT_01s0011g04670.t01
RefSeq:XP_002284094	RefSeq:XP_002284094.1	RefSeq:XP_010659096.1	SEG:seg	:	:

Description

ABC transporter G family member 7 [Source:UniProtKB/TrEMBL;Acc:D7T8V5]

Coordinates

chr1:-:4195141..4204508

Molecular Weight (calculated)

79979.5 Da

IEP (calculated)

8.415

GRAVY (calculated)

-0.035

Length

729 amino acids

Sequence
(BLAST)

001: MVVFGGKRVA QLAGLGGNGV GQILAAVAAA LLFRLFSGPG PAVLPENEVE DDRDEIAGDS EGGEAPIAGK VFPVTIQWSN ITCSLSDKSS KSVRFLLKNV
101: SGEAKPGRLL AIMGPSGSGK TTLLNVLAGQ LMASPRLHLS GLLEVNGKAR SKKAYKFAYV RQEDLFFSQL TVRETLSLAA ELQLPELSSV EDRDEYVNNL
201: LYKLGLVSCA DSNVGDAKVR GISGGEKKRL SLACELIASP SVIFADEPTT GLDAFQAEKV METLRLLAQD GHTVICSIHQ PRSSVYGKFD DIVLLTEGAL
301: VYAGPARDDP LAYFSRFGYH CPDHVNPAEF LADLISIDYS SADSVYSSQK RIDGLVESFS QQTSAVLYAT PLTRRESFKS TRKFSEKAVV KKKGVWWRQF
401: WLLLRRAWMQ ASRDGPTNKV RSRMSIASAI IFGSVFWRMG RSQTSIQDRM GLLQVAAINT AMAALTKTVG VFPKERAIVD RERAKGSYAL GPYLLSKLLA
501: EIPVGAAFPL MFGAVLYPMA RLHPTLFKFG QFCGIVTVES FAASAMGLTV GAMVPTPEAA MAVGPSLMTV FIVFGGYYVN AENTPIIFRW IPRISLIRWA
601: FQGLCINEFS GLEFDHQQPF DIQTGEQALE RLSFGGSRIR DTVMAQSRIL LFWYFTTYRL LERNKPKYQQ LEPPSPDQVQ PPLQLEPSDT DQAKPNQQLE
701: PPLAQVESTQ KLESPPLDQI QPFILEGAK

Best Arabidopsis Sequence Match ( AT2G01320.2 )
(BLAST)

001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGSKV

Arabidopsis Description

ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.