Factsheet for VIT_07s0031g02550.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	73.54	75.32
CDX89610	Canola	cytosol, peroxisome, plasma membrane	70.71	74.21
CDX93119	Canola	cytosol, peroxisome, plasma membrane	70.71	74.21
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.23	73.58
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	74.02	72.42
KRH64027	Soybean	extracellular	72.6	72.03
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	74.02	71.87
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	58.27	71.29
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	72.6	71.03
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	68.19	70.52
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	70.24	69.58
GSMUA_Achr9P00310_001	Banana	cytosol	53.54	65.76
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	25.04	57.82
EES01897	Sorghum	cytosol, plasma membrane, plastid	54.49	51.41
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	43.78	50.18
TraesCS2B01G612200.1	Wheat	plasma membrane	53.07	49.93
TraesCS2A01G574700.1	Wheat	plasma membrane	51.02	49.85
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	46.46	49.75
TraesCS2D01G585300.1	Wheat	plasma membrane	52.76	49.7
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	45.83	47.47
Zm00001d026706_P005	Maize	plasma membrane	53.54	45.33
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.05	42.58
VIT_16s0050g01620.t01	Wine grape	cytosol	39.69	42.21
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	34.49	29.76
VIT_17s0000g02200.t01	Wine grape	cytosol	32.76	29.5
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	33.86	28.78
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.3	26.81
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.61	25.45
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.72	23.9
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.35	23.82
VIT_19s0015g00960.t01	Wine grape	peroxisome	25.51	23.62
VIT_08s0032g00790.t01	Wine grape	plastid	26.14	22.19
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	25.2	21.95
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.46	21.65

Protein Annotations

EntrezGene:100250895	wikigene:100250895	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM453839	ProteinID:CAN65468	ProteinID:CAN65468.1	ProteinID:CCB47157
ProteinID:CCB47157.1	ncoils:Coil	UniProt:F6H4E6	EMBL:FN595233	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100250895	wikigene:LOC100250895
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF230	SMART:SM00382	SUPFAM:SSF52540	TIGR:TC55855	TIGR:TC62723	TMHMM:TMhelix
UniParc:UPI00015CA28A	ArrayExpress:VIT_07s0031g02550	EnsemblPlantsGene:VIT_07s0031g02550	EnsemblPlants:VIT_07s0031g02550.t01	unigene:Vvi.5178	RefSeq:XP_002274622
RefSeq:XP_002274622.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:18781479..18783655

Molecular Weight (calculated)

71135.7 Da

IEP (calculated)

9.035

GRAVY (calculated)

0.229

Length

635 amino acids

Sequence
(BLAST)

001: MKKQGCEIEA IGINYQIYTH KGEQSSPFKI FNKQVVKGGT LSPGVRHVLK DVNCEAKPWE ILAIVGPSGA GKSSLLEILA GKIAPQTASI CVNQKPMDKA
101: QFKKISGFVA QKDTLFPLLT VEETLMFSAK LRLRLPPAQL ISKVKSLIQE LGLEHVAGVR VGDDKARGIS GGERRRVSIG VDAVHDPKVL ILDEPTSGLD
201: STSALQIIDM LKTMAESRGR TIILSIHQPG FRIVKLFNSI LLLANGSVLH HGTVEQLGLN LRLMGLEPPL HVNIVEYAIE SIENIQEQKQ QRQQKQQQQQ
301: QAVVQESTAA QLQAIPRGRS GNCTLQQLFQ QSKVIDEEII INTSIDFARG FANSRFRETI ILTHRFSKNI FRTKELFACR TLQMLIAGLV LGSIFYQLKD
401: NLIGAEERVG LFAFILTFLL SCTTEALPIF LQERDILMKE TSSGSYRVSS YAIANGLVYL PFLLILAILF SLPLYLLVGL NPNFMAFMHF LFLIWLILYT
501: ANSVVVCFSA LVPNFIVGYS VISGVMGSFF LFSGYFISKN GMPDYWIFMH YISLFKYPFE GFLINEFSGP GKCLDYMFGT CVVKGEDVLR EEGYGEESRW
601: RNVVIMVCFI LLYRFISYVI LRCRCSQRSL KGVLV

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.