Factsheet for VIT_02s0087g00840.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	84.17	83.92
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	83.41	83.03
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	80.52	81.26
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	79.45	80.81
PGSC0003DMT400004973	Potato	cytosol, peroxisome, plasma membrane	79.45	80.81
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	78.39	80.34
CDY50951	Canola	cytosol, peroxisome, plastid	78.39	80.34
CDY47690	Canola	cytosol, peroxisome, plastid	78.08	80.03
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	78.39	79.48
CDY49155	Canola	cytosol, peroxisome, plasma membrane	78.39	79.35
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	79.15	79.27
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	76.56	76.79
PGSC0003DMT400047547	Potato	cytosol, peroxisome, plasma membrane	77.32	76.74
CDY12299	Canola	cytosol, peroxisome, plasma membrane	79.0	72.89
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	78.39	70.84
CDY12359	Canola	cytosol, nucleus, plasma membrane	29.68	64.78
GSMUA_Achr2P04580_001	Banana	plasma membrane	57.99	63.61
TraesCS4A01G370500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	62.4	60.21
TraesCS7A01G071700.1	Wheat	plastid	61.95	59.77
HORVU7Hr1G014870.1	Barley	cytosol, peroxisome, plasma membrane	61.95	59.42
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	61.8	59.1
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	54.64	57.62
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	59.21	57.54
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	64.23	56.64
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	62.71	54.43
Zm00001d024497_P001	Maize	plastid	59.51	53.78
EES13415	Sorghum	plastid	60.73	53.27
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.97	45.48
VIT_08s0032g00790.t01	Wine grape	plastid	47.49	41.71
VIT_19s0015g00960.t01	Wine grape	peroxisome	42.31	40.52
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	46.88	39.69
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	26.48	28.39
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	25.27	27.99
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.48	27.75
VIT_17s0000g02200.t01	Wine grape	cytosol	27.55	25.67
VIT_16s0050g01620.t01	Wine grape	cytosol	22.83	25.13
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.9	24.72
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.4	24.46
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.09	23.83
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	25.72	23.18

Protein Annotations

EntrezGene:100247745	wikigene:100247745	MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EMBL:AM484899	ProteinID:CAN70956	ProteinID:CAN70956.1
ProteinID:CBI29188	ProteinID:CBI29188.3	ncoils:Coil	UniProt:D7TFB5	EMBL:FN595769	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EntrezGene:LOC100247745
wikigene:LOC100247745	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF213	SMART:SM00382	SUPFAM:SSF52540	TIGR:TC54614	TMHMM:TMhelix
UniParc:UPI0001BE32A4	ArrayExpress:VIT_02s0087g00840	EnsemblPlantsGene:VIT_02s0087g00840	EnsemblPlants:VIT_02s0087g00840.t01	unigene:Vvi.15723	RefSeq:XP_002270533
RefSeq:XP_002270533.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:18431575..18434854

Molecular Weight (calculated)

73662.9 Da

IEP (calculated)

9.046

GRAVY (calculated)

0.079

Length

657 amino acids

Sequence
(BLAST)

001: MPLNCIAPKP ENQGNIPMEG LSRTSESDNS AVLTYPMQTN SQSILQHTLY SINLKFEEVV YKVKLEQKGF CWGGAWSTRD KTILNGITGM VCPGEILAML
101: GPSGSGKTTL LTALGGRLNG KLSGKITYNG QPFSGAVKRR TGFVAQDDVL YPHLTVTETL LFTALLRLPK SLARNEKAQH VERVISELGL TRCRNSMIGG
201: PLFRGISGGE KKRVSIGQEM LINPSLLLLD EPTSGLDSTT AQRILTTIKR LASGGRTVVT TIHQPSSRLY HMFDKVILLS EGCPIYNGPA STAMEYFSSV
301: GFSTCVTVNP ADLLLDLANG ISPDSKQAAE QSENMEQEQK SVREALISAY EKNISTRLKA ELCSVDVNNY NYTKDGRARN NFKADQWCTS WWHQFMVLLQ
401: RGLRERRYEA FNRLRIFQVI SVAVLGGLLW WHTPTSHIED RIALLFFFSV FWGFYPLYNA VFTFPQERRM LIKERSSGMY RLSSYFLART FGDLPLELAL
501: PTAFVIIIYW MGGLKPDPIT FILSLLVVLY NVLVSQSLGL AIGAILMDIK QATTLASVTT LVFLIAGGYY VQQIPPFIVW LKYLSYSYYC YKLLLGIQYS
601: EDDYYECSKG VFCRVVDFPA VKSVGLNHLW IDVCIMALML VGYRLVAYLA LHRVQLR

Best Arabidopsis Sequence Match ( AT1G31770.1 )
(BLAST)

001: MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKFEEVVY KVKIEQTSQC MGSWKSKEKT ILNGITGMVC PGEFLAMLGP
101: SGSGKTTLLS ALGGRLSKTF SGKVMYNGQP FSGCIKRRTG FVAQDDVLYP HLTVWETLFF TALLRLPSSL TRDEKAEHVD RVIAELGLNR CTNSMIGGPL
201: FRGISGGEKK RVSIGQEMLI NPSLLLLDEP TSGLDSTTAH RIVTTIKRLA SGGRTVVTTI HQPSSRIYHM FDKVVLLSEG SPIYYGAASS AVEYFSSLGF
301: STSLTVNPAD LLLDLANGIP PDTQKETSEQ EQKTVKETLV SAYEKNISTK LKAELCNAES HSYEYTKAAA KNLKSEQWCT TWWYQFTVLL QRGVRERRFE
401: SFNKLRIFQV ISVAFLGGLL WWHTPKSHIQ DRTALLFFFS VFWGFYPLYN AVFTFPQEKR MLIKERSSGM YRLSSYFMAR NVGDLPLELA LPTAFVFIIY
501: WMGGLKPDPT TFILSLLVVL YSVLVAQGLG LAFGALLMNI KQATTLASVT TLVFLIAGGY YVQQIPPFIV WLKYLSYSYY CYKLLLGIQY TDDDYYECSK
601: GVWCRVGDFP AIKSMGLNNL WIDVFVMGVM LVGYRLMAYM ALHRVKLR

Arabidopsis Description

ABCG14ABC transporter G family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.