Factsheet for Solyc08g005580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047547	Potato	cytosol, peroxisome, plasma membrane	95.73	94.71
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	85.19	86.38
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.79	76.56
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	76.79	76.21
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	76.64	76.18
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	75.42	75.88
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	74.66	74.54
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	73.74	74.54
CDY49155	Canola	cytosol, peroxisome, plasma membrane	73.28	73.96
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	71.91	73.48
CDY47690	Canola	cytosol, peroxisome, plastid	71.91	73.48
CDY50951	Canola	cytosol, peroxisome, plastid	71.91	73.48
CDY12299	Canola	cytosol, peroxisome, plasma membrane	72.98	67.13
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.28	66.02
CDY12359	Canola	cytosol, nucleus, plasma membrane	29.01	63.12
GSMUA_Achr2P04580_001	Banana	plasma membrane	56.64	61.94
TraesCS4A01G370500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	60.61	58.3
TraesCS7A01G071700.1	Wheat	plastid	60.0	57.71
HORVU7Hr1G014870.1	Barley	cytosol, peroxisome, plasma membrane	60.31	57.66
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	60.31	57.5
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	57.71	56.0
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	61.68	54.23
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	50.08	53.51
Zm00001d024497_P001	Maize	plastid	58.63	52.82
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	60.76	52.58
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.23	52.39
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.77	51.75
EES13415	Sorghum	plastid	58.93	51.54
Solyc11g018690.1.1	Tomato	cytosol	24.43	46.78
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	20.61	46.55
Solyc01g006720.2.1	Tomato	plastid	45.04	40.75
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	41.83	37.95
Solyc07g065780.1.1	Tomato	mitochondrion	25.5	37.53
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.11	27.54
Solyc07g053300.1.1	Tomato	cytosol	24.73	26.64
Solyc03g113690.1.1	Tomato	plastid	26.56	26.44
Solyc03g007690.1.1	Tomato	plastid	23.66	25.96
Solyc05g008350.2.1	Tomato	nucleus, plastid	28.09	25.92
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.97	25.57
Solyc04g010210.1.1	Tomato	extracellular	26.26	24.09
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	25.95	23.68
Solyc05g054890.2.1	Tomato	cytosol	26.56	23.2
Solyc09g098410.1.1	Tomato	nucleus	25.8	23.18
Solyc09g005970.1.1	Tomato	plasma membrane	25.95	23.04
Solyc01g097430.2.1	Tomato	cytosol, nucleus	25.65	20.05

Protein Annotations

MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K4CI49	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF213	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc08g005580.2
EnsemblPlants:Solyc08g005580.2.1	TMHMM:TMhelix	UniParc:UPI000276BA67	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:438143..441206

Molecular Weight (calculated)

73099.0 Da

IEP (calculated)

8.979

GRAVY (calculated)

0.043

Length

655 amino acids

Sequence
(BLAST)

001: MHLHGVTPKP ENGGTDLMEA STNSPNSSKQ YDKSCLALPV QIKSQQSYLQ KAMYPITLKF EEIVYKISQE NKGMCCGGSS NTKEKTILNG VTGTVYPGEM
101: LAMLGPSGSG KTTLLTALGG RLSGKLSGKI TYNSQPFSGS IKRRTGFVSQ DDVLYPHLTV IETLLFTALL RLPQNLERDE KVRHVEHVIA ELGLNKCRNS
201: MIGGPLFRGI SGGEKKRVSI GQEMLINPSL LLLDEPTSGL DSTTALRILN TVKRLASGGR TVITTIHQPS NRLYYMFDKV VLLSEGCPIY YGPASTALEY
301: FSSIGFSISI TINPADLLLD LANGIGSDTK NGNDQGDSTE QEKKLVREAL ISAYEMNIST RLKTEVCGNY SCTNDVSTRN GVKLEQWCTS WMHQFKVLLM
401: RGLRERRHET FNRLRIFQVI SVAFLAGLLW WHTPTSHIED RIAMLFFFAV FWGFYPLYNA VFTFPQERRM LIKERSSGMY RLSSYFLAKT VGDLPLELAL
501: PTAFTFILYW MGGLKPDPTT FILSLLVVLY NVLVSQSLGL AFGALLMDVK QATTLASVTT LVFLIAGGYY IQQIPTFIVW LKYLSYSYYS YKLLLGVQYN
601: DNDYYECSKG VYCQVANLPA IESVGLNNMW IDVSVMAVML VGYRVVAYLA LTRVR

Best Arabidopsis Sequence Match ( AT1G31770.1 )
(BLAST)

001: MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKFEEVVY KVKIEQTSQC MGSWKSKEKT ILNGITGMVC PGEFLAMLGP
101: SGSGKTTLLS ALGGRLSKTF SGKVMYNGQP FSGCIKRRTG FVAQDDVLYP HLTVWETLFF TALLRLPSSL TRDEKAEHVD RVIAELGLNR CTNSMIGGPL
201: FRGISGGEKK RVSIGQEMLI NPSLLLLDEP TSGLDSTTAH RIVTTIKRLA SGGRTVVTTI HQPSSRIYHM FDKVVLLSEG SPIYYGAASS AVEYFSSLGF
301: STSLTVNPAD LLLDLANGIP PDTQKETSEQ EQKTVKETLV SAYEKNISTK LKAELCNAES HSYEYTKAAA KNLKSEQWCT TWWYQFTVLL QRGVRERRFE
401: SFNKLRIFQV ISVAFLGGLL WWHTPKSHIQ DRTALLFFFS VFWGFYPLYN AVFTFPQEKR MLIKERSSGM YRLSSYFMAR NVGDLPLELA LPTAFVFIIY
501: WMGGLKPDPT TFILSLLVVL YSVLVAQGLG LAFGALLMNI KQATTLASVT TLVFLIAGGY YVQQIPPFIV WLKYLSYSYY CYKLLLGIQY TDDDYYECSK
601: GVWCRVGDFP AIKSMGLNNL WIDVFVMGVM LVGYRLMAYM ALHRVKLR

Arabidopsis Description

ABCG14ABC transporter G family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.