Factsheet for Solyc04g010200.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	93.59	92.82
Solyc04g010210.1.1	Tomato	extracellular	87.19	87.68
Solyc05g054890.2.1	Tomato	cytosol	78.83	75.47
Bra005051.1-P	Field mustard	plastid	62.95	73.62
CDX74853	Canola	plastid	62.95	73.26
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.04	73.09
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	73.96	70.8
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	71.31	70.43
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	71.17	70.39
CDX69629	Canola	plastid	71.31	70.33
AT2G39350.1	Thale cress	cytosol	70.47	68.38
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	69.92	68.21
CDY09810	Canola	plastid	71.31	68.09
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.06	67.61
Solyc09g005970.1.1	Tomato	plasma membrane	67.69	65.85
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	63.93	65.01
GSMUA_Achr5P28450_001	Banana	plasma membrane	61.56	63.32
Os05t0120200-01	Rice	plasma membrane	60.31	61.95
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	63.37	61.24
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	58.08	61.23
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.52	60.65
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	62.67	60.4
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	66.43	60.38
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	58.08	60.26
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	63.51	60.24
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	63.51	60.24
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	58.22	60.23
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.1	60.21
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.1	60.21
Os05t0120000-00	Rice	plasma membrane	56.96	60.15
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	66.43	59.92
TraesCS3B01G387500.1	Wheat	plastid	63.09	59.84
Os01t0836600-01	Rice	plasma membrane	62.4	59.81
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	62.95	59.79
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	62.95	59.79
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	59.33	59.66
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	65.74	59.6
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	58.08	59.57
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	59.05	59.55
Zm00001d042953_P001	Maize	plasma membrane	63.09	59.53
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	65.88	59.42
Zm00001d035553_P001	Maize	plasma membrane	58.91	59.24
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	55.01	59.13
EES17614	Sorghum	cytosol, peroxisome, vacuole	58.36	59.01
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	54.46	57.93
Os03t0281900-01	Rice	cytosol, plasma membrane	63.37	57.81
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	54.18	57.63
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	65.74	56.12
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	58.22	52.98
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	63.23	50.5
HORVU4Hr1G058070.2	Barley	cytosol	51.95	45.77
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	40.67	44.51
HORVU5Hr1G021110.1	Barley	cytosol	25.77	43.12
CDX76122	Canola	plasma membrane	68.25	38.22
CDY02906	Canola	plasma membrane	68.38	38.21
Bra014776.1-P	Field mustard	cytosol	68.25	38.16
Os03t0282100-00	Rice	cytosol, nucleus, plastid	39.0	36.55
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	30.64	35.43
Solyc09g098410.1.1	Tomato	nucleus	35.24	34.71
GSMUA_Achr6P08820_001	Banana	plasma membrane	57.66	33.5
Solyc07g053300.1.1	Tomato	cytosol	28.27	33.39
Solyc01g097430.2.1	Tomato	cytosol, nucleus	38.86	33.29
Solyc11g018690.1.1	Tomato	cytosol	15.74	33.04
Solyc03g007690.1.1	Tomato	plastid	27.3	32.83
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	27.86	32.57
Solyc03g113690.1.1	Tomato	plastid	28.55	31.16
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	24.23	28.39
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.79	28.25
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.37	27.87
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	24.79	26.37
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.68	25.95
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.26	25.85
Solyc01g006720.2.1	Tomato	plastid	25.49	25.28
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.82	23.68
Solyc05g008350.2.1	Tomato	nucleus, plastid	23.4	23.66
Solyc07g065780.1.1	Tomato	mitochondrion	13.93	22.47
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	8.08	20.0

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BPH4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc04g010200.1	EnsemblPlants:Solyc04g010200.1.1
TMHMM:TMhelix	UniParc:UPI0002765E11	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:+:3520574..3522730

Molecular Weight (calculated)

80537.8 Da

IEP (calculated)

9.442

GRAVY (calculated)

0.134

Length

718 amino acids

Sequence
(BLAST)

001: MSRIVAQNVS PVRDCVPLYD RRQTVEMSSP TFAQLLNNVG DDVTGDETGG SVHQILTMEL PLQQSIPFVL SFSNLTYSVR VRRKNIFPAM SGRRNRTDEP
101: RCTRTKVLLN DISGEARDGE LLAVLGASGS GKSTLIDALA NRISKDSLKG EMKLNGEPLH SKLLKVISAY VMQDDLLYPM LTVEETLMFS AEFRLPRTLS
201: KSKKKSRVQA LIDQLGLRNA AKTIIGDEGH RGVSGGERRR VSIGIDIIHD PIILFLDEPT SGLDSTSAFM MVKVLQRIAQ SGSIVIMSIH QPSYRILGLL
301: DRLIFLSRGQ TVYSGSPFNL PQFFADFGHP IPENENKTEF ALDLIRELEG SPNGTSSLVE FNRKWKNSST TSTIYDLSLK EAISASISRG KLVSGAANPT
401: SMVPTFANPI WIEMAVLSNR SFTNSWRMPE IFAVRFGAVM VTGFILATLF WRLDDSPRGV RERIGFFAFA MSTTYYTCAE ALPVFIHERF IFMRETAYNA
501: YRRSSYCLSH ALVSIPSLIF LSLSFAALTF WAVGLDGGAS SFLFYLSVVL ASFWAGNSFV TFLSCVIPHV MIGYVIVVAI FAYYLLFSGF FLNRDRIPSY
601: WIWFHYISLV KYPYEAVLQN EFKDPMKCFV RGIQLFDNSP LGDVPISLKE KLLDSISNTL NVRITSSTCV VTGADILVQQ GITQLNKWNC LWVTIAWGFF
701: FRILFYFTLL LGSKNKRR

Best Arabidopsis Sequence Match ( AT5G13580.1 )
(BLAST)

001: MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR

Arabidopsis Description

ABCG6ABC transporter G family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.