CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	76.93	79.7
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.27	78.58
Bra005051.1-P	Field mustard	plastid	63.87	78.01
Solyc05g054890.2.1	Tomato	cytosol	77.87	77.87
CDX74853	Canola	plastid	63.87	77.63
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	72.8	75.21
CDX69629	Canola	plastid	72.93	75.14
PGSC0003DMT400029838	Potato	extracellular	69.6	75.11
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	72.8	75.1
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	72.27	74.86
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.8	73.96
CDY09810	Canola	plastid	73.47	73.27
Solyc04g010210.1.1	Tomato	extracellular	69.6	73.11
AT2G39350.1	Thale cress	cytosol	71.87	72.84
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	71.73	72.31
KRH67592	Soybean	plastid	70.53	72.07
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	70.53	71.88
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	70.4	71.74
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	63.2	67.14
GSMUA_Achr5P28450_001	Banana	plasma membrane	61.2	65.76
Os05t0120200-01	Rice	plasma membrane	59.6	63.95
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	62.4	62.99
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	57.07	62.85
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	66.13	62.78
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.8	62.56
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.8	62.56
Os05t0120000-00	Rice	plasma membrane	56.67	62.5
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	62.0	62.42
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	66.0	62.19
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.4	62.11
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	65.33	61.87
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	62.4	61.82
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	62.4	61.82
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	65.47	61.68
TraesCS3B01G387500.1	Wheat	plastid	62.13	61.56
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	62.0	61.51
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	62.0	61.51
Os01t0836600-01	Rice	plasma membrane	61.33	61.42
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.4	61.34
Zm00001d035553_P001	Maize	plasma membrane	58.27	61.2
EES17614	Sorghum	cytosol, peroxisome, vacuole	57.87	61.13
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	58.0	61.1
Zm00001d042953_P001	Maize	plasma membrane	61.73	60.84
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	56.13	60.84
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	56.27	60.81
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	54.0	60.63
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	56.27	60.29
Os03t0281900-01	Rice	cytosol, plasma membrane	62.4	59.47
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	52.67	58.52
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	65.33	58.26
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	52.4	58.22
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	56.13	53.36
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	61.6	51.39
HORVU4Hr1G058070.2	Barley	cytosol	51.07	46.99
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	40.53	46.34
HORVU5Hr1G021110.1	Barley	cytosol	24.8	43.36
CDX76122	Canola	plasma membrane	69.47	40.64
CDY02906	Canola	plasma membrane	69.6	40.62
Bra014776.1-P	Field mustard	cytosol	69.47	40.58
Os03t0282100-00	Rice	cytosol, nucleus, plastid	38.67	37.86
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	33.47	37.41
KRH39507	Soybean	cytosol	36.27	37.26
KRH60557	Soybean	cytosol	38.93	36.55
KRH41868	Soybean	cytosol	38.4	36.27
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	28.93	35.52
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	28.8	35.41
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	28.4	34.35
KRG89682	Soybean	cytosol, nucleus, peroxisome	29.73	33.99
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	29.33	33.9
GSMUA_Achr6P08820_001	Banana	plasma membrane	55.73	33.82
KRH64027	Soybean	extracellular	28.8	33.75
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	20.8	33.19
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	28.93	33.18
KRH50602	Soybean	plastid	28.8	32.98
KRG91599	Soybean	cytosol, plastid	24.8	32.57
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	24.13	28.87
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	24.0	28.85
KRH34992	Soybean	cytosol, plasma membrane, plastid	25.6	28.7
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.6	28.66
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	24.53	28.26
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	24.67	28.07
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	24.4	27.9
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	24.4	27.73
KRH20507	Soybean	cytosol	23.07	27.5
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	24.4	26.83
KRH46415	Soybean	plasma membrane	17.47	26.79
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	24.13	26.7
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.13	26.63
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.0	26.42
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	26.13	26.38
KRH68048	Soybean	plastid	26.0	26.35
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	23.87	26.17
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	21.6	26.0
KRG92003	Soybean	cytosol	23.6	25.95
KRH14200	Soybean	cytosol	23.47	25.66
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	23.47	25.66
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	23.33	25.58
KRH35792	Soybean	plasma membrane	22.8	23.59
KRG90976	Soybean	plasma membrane	22.4	23.5

Protein Annotations

EntrezGene:100803658	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:ACUP02012777	EnsemblPlantsGene:GLYMA_20G242000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607
GO:GO:0009624	GO:GO:0009987	GO:GO:0010345	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0019748	GO:GO:0042626	GO:GO:0055085	UniProt:I1NJ72	InterPro:IPR003439
EnsemblPlants:KRG92984	ProteinID:KRG92984	ProteinID:KRG92984.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000233DE29	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:47288044..47290952

Molecular Weight (calculated)

83134.7 Da

IEP (calculated)

9.290

GRAVY (calculated)

0.103

Length

750 amino acids

Sequence
(BLAST)

001: MSSRIVAENA LSLTNIVTPP YFDLMELDDL TRRPSAGDMP TLGQLLKHVG DVRKEASGDG SETPVHHALD IPGIEPRSLP FVLSFSNLTY SIKSRRKMSL
101: SSIFPRRSNR LGAVAEAPTV GESMFTRTKT LLNDISGEAR DGEIMAVLGA SGSGKSTLID ALANRIAKGS LKGTVALNGE ALESRLLKVI SAYVMQDDLL
201: FPMLTVEETL MFAAEFRLPR TLSKSKKSAR VQALIDQLGL RNAAKTVIGD EGHRGVSGGE RRRVSIGTDI IHDPILLFLD EPTSGLDSTS AYMVVKVLQR
301: IAQSGSIVIM SIHQPSYRIL GLLDRMIFLS RGQTVYSGSP SQLPLYFSEF GHPIPETDNR TEFALDLIRE LEGSPGGTKS LVEFNKSWQS MTKHHQEKEE
401: ERNGLSLKEA ISASISRGKL VSGASNTNPN PSSMVPTFAN QFWVEMATLS KRSFLNSRRM PELIGIRLGT VMVTGFILAT MFWQLDNSPK GVQERLGFFA
501: FAMSTTFYTT ADALPVFLQE RYIFMRETAY NAYRRLSYLV SHALVALPAL AFLSLAFAAA TFWAVGLDGG ISGFLFYFLI IFASFWAGNS FVTFLSGVVP
601: HVMLGYTIVV AILAYFLLFS GFFINRDRIP SYWIWFHYLS LVKYPYEAVL QNEFDDPVKC FVRGVQIFDN TPLGSVPEPL KVKLLETMSS TLGTKITTST
701: CLTTGADILQ QNGVTDLTKW NCFWITVAWG FFFRFLFYLS LLLGSKNKRS

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.