Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008817.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 91.33 | 91.46 |
| CDX69629 | Canola | plastid | 91.33 | 91.21 |
| CDY09810 | Canola | plastid | 92.16 | 89.1 |
| PGSC0003DMT400060438 | Potato | cytosol, peroxisome, plasma membrane, plastid | 73.59 | 73.89 |
| VIT_13s0067g03750.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 75.38 | 73.36 |
| AT3G55090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 74.14 | 73.23 |
| KRG92984 | Soybean | cytosol, peroxisome, plasma membrane | 75.1 | 72.8 |
| AT2G39350.1 | Thale cress | cytosol | 73.45 | 72.16 |
| Solyc05g054890.2.1 | Tomato | cytosol | 74.42 | 72.13 |
| Solyc04g010200.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 70.43 | 71.31 |
| PGSC0003DMT400029881 | Potato | cytosol, peroxisome, plasma membrane | 70.98 | 71.27 |
| PGSC0003DMT400029838 | Potato | extracellular | 68.09 | 71.22 |
| Solyc04g010210.1.1 | Tomato | extracellular | 68.78 | 70.03 |
| AT3G53510.1 | Thale cress | plasma membrane | 69.19 | 68.06 |
| AT2G37360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.91 | 66.36 |
| AT3G55100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 59.83 | 65.71 |
| GSMUA_Achr8P02140_001 | Banana | cytosol, peroxisome, plasma membrane | 63.41 | 65.3 |
| GSMUA_Achr5P28450_001 | Banana | plasma membrane | 61.35 | 63.9 |
| AT3G55110.1 | Thale cress | cytosol, peroxisome, plasma membrane | 61.35 | 62.99 |
| Os05t0120200-01 | Rice | plasma membrane | 60.25 | 62.66 |
| HORVU5Hr1G021120.1 | Barley | cytosol, peroxisome, plasma membrane | 58.18 | 62.11 |
| Zm00001d028689_P001 | Maize | cytosol, peroxisome, plasma membrane | 67.4 | 62.03 |
| TraesCS5D01G093600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 57.91 | 61.82 |
| TraesCS5A01G078500.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 57.63 | 61.53 |
| Zm00001d012438_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 62.86 | 61.51 |
| EER95064 | Sorghum | cytosol, peroxisome, plasma membrane | 67.26 | 61.43 |
| TraesCS5B01G087400.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 57.5 | 61.38 |
| EES01718 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 62.86 | 61.34 |
| HORVU0Hr1G007130.1 | Barley | plasma membrane, plastid | 63.82 | 61.29 |
| HORVU3Hr1G087130.1 | Barley | plasma membrane, plastid | 63.82 | 61.29 |
| AT3G55130.1 | Thale cress | mitochondrion, peroxisome, plasma membrane | 61.07 | 61.24 |
| TraesCS4B01G200600.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.71 | 61.24 |
| TraesCS3A01G354500.1 | Wheat | plasma membrane, plastid | 63.55 | 61.11 |
| TraesCS4A01G103400.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.85 | 61.06 |
| TraesCS3B01G387500.1 | Wheat | plastid | 63.55 | 61.03 |
| Os05t0120000-00 | Rice | plasma membrane | 57.08 | 61.03 |
| TraesCS3D01G348400.1 | Wheat | plasma membrane, plastid | 63.41 | 60.98 |
| Zm00001d035553_P001 | Maize | plasma membrane | 59.83 | 60.92 |
| TraesCS1B01G066000.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.05 | 60.81 |
| Os01t0836600-01 | Rice | plasma membrane | 62.31 | 60.48 |
| TraesCS1D01G052000.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.5 | 60.4 |
| HORVU3Hr1G007180.1 | Barley | cytosol, peroxisome, plasma membrane | 55.3 | 60.18 |
| TraesCS1A01G049600.2 | Wheat | cytosol, peroxisome, plasma membrane | 57.77 | 60.0 |
| Zm00001d011006_P001 | Maize | cytosol, peroxisome, vacuole | 58.73 | 59.97 |
| EES18923 | Sorghum | cytosol, peroxisome, plasma membrane | 58.87 | 59.94 |
| Os03t0281900-01 | Rice | cytosol, plasma membrane | 64.79 | 59.85 |
| EES17614 | Sorghum | cytosol, peroxisome, vacuole | 58.32 | 59.72 |
| Zm00001d042953_P001 | Maize | plasma membrane | 62.31 | 59.53 |
| TraesCS3B01G047600.1 | Wheat | cytosol, peroxisome, vacuole | 54.2 | 58.37 |
| TraesCS3A01G036400.1 | Wheat | cytosol, peroxisome, vacuole | 54.2 | 58.37 |
| TraesCS4D01G201700.1 | Wheat | mitochondrion, plasma membrane, plastid | 66.58 | 57.55 |
| HORVU1Hr1G009920.2 | Barley | plasma membrane, plastid | 57.77 | 53.23 |
| GSMUA_Achr6P33280_001 | Banana | cytosol, peroxisome, plasma membrane | 62.45 | 50.5 |
| HORVU4Hr1G058160.2 | Barley | cytosol, peroxisome | 42.5 | 47.1 |
| HORVU4Hr1G058070.2 | Barley | cytosol | 51.31 | 45.77 |
| HORVU5Hr1G021110.1 | Barley | cytosol | 25.17 | 42.66 |
| Os03t0282100-00 | Rice | cytosol, nucleus, plastid | 37.41 | 35.51 |
| AT1G53270.1 | Thale cress | plasma membrane | 28.2 | 34.75 |
| AT2G13610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 30.81 | 34.51 |
| GSMUA_Achr6P08820_001 | Banana | plasma membrane | 56.95 | 33.5 |
| AT5G52860.1 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 27.1 | 33.45 |
| AT4G25750.1 | Thale cress | plasma membrane | 26.27 | 33.1 |
| AT5G19410.2 | Thale cress | plastid | 28.34 | 32.54 |
| AT4G27420.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.13 | 29.78 |
| AT1G71960.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.96 | 29.61 |
| AT3G25620.2 | Thale cress | cytosol, nucleus, plasma membrane, plastid | 26.68 | 28.87 |
| AT1G31770.1 | Thale cress | cytosol, nucleus, peroxisome | 25.31 | 28.4 |
| AT5G06530.1 | Thale cress | plasma membrane | 27.65 | 26.76 |
| AT3G13220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 24.62 | 26.13 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 22.83 | 22.8 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | EntrezGene:831202 | UniProt:A0A178UDB5 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AED91914.1 | ArrayExpress:AT5G13580 | EnsemblPlantsGene:AT5G13580 | RefSeq:AT5G13580 |
| TAIR:AT5G13580 | RefSeq:AT5G13580-TAIR-G | EnsemblPlants:AT5G13580.1 | TAIR:AT5G13580.1 | Unigene:At.32050 | ProteinID:BAB08684.1 |
| EMBL:BT003884 | EMBL:BT004956 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009624 | GO:GO:0009987 | GO:GO:0010345 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0019748 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | RefSeq:NP_196862.1 |
| ProteinID:OAO90681.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00211 |
| PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF428 | UniProt:Q9FNB5 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI000000C1C0 | SEG:seg | : | : | : |
Description
ABCG6ABC transporter G family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB5]
Coordinates
chr5:+:4370692..4373201
Molecular Weight (calculated)
80305.5 Da
IEP (calculated)
10.063
GRAVY (calculated)
0.163
Length
727 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.