Factsheet for TraesCS4B01G200600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	99.62	99.12
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	99.49	93.7
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	88.51	88.73
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	88.38	87.94
Os03t0281900-01	Rice	cytosol, plasma membrane	78.91	79.42
HORVU4Hr1G058070.2	Barley	cytosol	78.66	76.44
CDY44641	Canola	plasma membrane	26.89	71.72
Bra005049.1-P	Field mustard	plasma membrane	26.77	71.38
Bra005051.1-P	Field mustard	plastid	54.42	70.2
CDX74853	Canola	plastid	54.42	69.85
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	61.99	67.82
CDX69629	Canola	plastid	61.36	66.76
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	61.24	66.71
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	61.11	66.67
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.63	66.4
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	61.62	66.3
Solyc05g054890.2.1	Tomato	cytosol	62.63	66.13
KRH67592	Soybean	plastid	61.24	66.08
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.6	65.74
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.98	65.62
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	61.87	65.33
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	60.61	65.22
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	59.6	65.19
PGSC0003DMT400029838	Potato	extracellular	57.2	65.18
CDY09810	Canola	plastid	61.62	64.89
Solyc04g010210.1.1	Tomato	extracellular	58.46	64.85
AT2G39350.1	Thale cress	cytosol	60.48	64.73
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	60.35	64.25
AT3G53510.1	Thale cress	plasma membrane	59.85	64.14
Solyc09g005970.1.1	Tomato	plasma membrane	59.22	63.55
PGSC0003DMT400061466	Potato	plasma membrane	59.34	63.43
CDY18451	Canola	cytosol, peroxisome, plasma membrane	59.34	63.34
CDX93388	Canola	plasma membrane	59.22	63.29
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.09	63.07
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	59.47	62.38
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.28	61.97
CDX73549	Canola	cytosol, peroxisome, plasma membrane	58.33	61.11
CDY02907	Canola	cytosol, peroxisome, plasma membrane	48.99	61.1
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	53.28	60.81
TraesCS3B01G387500.1	Wheat	plastid	58.08	60.77
CDX76121	Canola	cytosol	35.48	59.66
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	50.51	59.26
CDX76119	Canola	cytosol, peroxisome, plasma membrane	49.87	59.22
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	49.49	59.21
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.89	58.8
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	52.27	58.47
CDX67624	Canola	cytosol, peroxisome, plasma membrane	52.15	58.42
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.02	58.27
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.15	58.17
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.77	57.91
CDY40201	Canola	cytosol	51.52	57.63
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	51.52	56.28
CDY37656	Canola	cytosol, peroxisome, plasma membrane	50.38	55.96
CDY65003	Canola	cytosol, peroxisome, plasma membrane	50.13	55.6
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.0	55.38
CDX73404	Canola	plasma membrane	51.77	51.96
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.71	49.15
CDY50899	Canola	cytosol	20.2	48.05
Bra014774.1-P	Field mustard	plasma membrane	36.87	46.13
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	33.59	37.25
CDX76122	Canola	plasma membrane	60.23	37.21
CDY02906	Canola	plasma membrane	60.35	37.2
Bra014776.1-P	Field mustard	cytosol	60.23	37.15
TraesCS3B01G251300.1	Wheat	plastid	26.14	34.21
GSMUA_Achr6P08820_001	Banana	plasma membrane	53.16	34.06
TraesCS5B01G203200.1	Wheat	cytosol	34.97	31.8
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	25.88	31.39
TraesCS2B01G612200.1	Wheat	plasma membrane	25.25	29.63
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	24.62	29.46
TraesCS4B01G095200.1	Wheat	plastid	22.73	27.95
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	22.73	25.97
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	24.62	25.66
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	21.34	25.45

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009628	GO:GO:0009653
GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009739	GO:GO:0009751	GO:GO:0009753
GO:GO:0009987	GO:GO:0010345	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0019748
GO:GO:0030312	GO:GO:0048225	GO:GO:0048226	GO:GO:0055075	GO:GO:0055078	GO:GO:0071456
GO:GO:0071470	GO:GO:0071472	GO:GO:1901002	GO:GO:1902074	GO:GO:2000032	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G200600	EnsemblPlants:TraesCS4B01G200600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:428844959..428847337

Molecular Weight (calculated)

87206.3 Da

IEP (calculated)

9.115

GRAVY (calculated)

0.024

Length

792 amino acids

Sequence
(BLAST)

001: MSRFVDKLPF FDRRASPMEE ADDIPRSGLL HLHGGHHHYQ HHHQPQTALM APEPSPPTTK QSSSTLAQLL KRVNEARSDA SSPNSSPSHY TIELGASMPG
101: STGSESEHTS LTGVGDGTLL PFVLKFTDLT YSVKQRKKGP CLPALPFRRG DAEPEAPRMK TLLDNISGEA REGEIMAVLG ASGSGKSTLI DALANRIRKE
201: SLHGSVTLNG ESMDNNLLKV ISAYVMQDDL LYPMLTVEET LMFSAEFRLP RSLPTKEKKK RVQALIDQLG LRNAANTIIG DEGHRGVSGG ERRRVSIGVD
301: IIHDPIVLFL DEPTSGLDST SAFMVVKVLQ RIAQSGSVVV MSIHQPSYRI LGLLDRLLFL SRGQTVYYGP PGSLSSFFSD FGKPIHDNEN PTEFALDLVR
401: ELETMPNGAC DLVEHNKSWQ KRMGPKMKHA DDGNGGKPSL SLQEAISASI SRGKLVSGAT DGNVTVPSPS SAPASAVAKF ANPFWIEMGV LTRRAFLNTK
501: RTPEIFVIRL GAVLITGFIL ATIFWRLDDS PKGVEERLGF FAIAMSTMFY TCSDALPVFL NERYIFLRET AYNAYRRSSY VLSHTIVGFP SLIVLSLAFA
601: VTTFFAVGLA GGAEGFFFFV AIVLASFWAG SGFATFLSGV VTNVQLGFPV VVSTLAYFLL FSGFFINRDR IPKYWLWFHY ASLVKYPYEA VMINEFSDPG
701: RCFVRGVQMF DNTPLSVLPA AIKVRVLRAM SSSLGINIGT ATCITTGPDF LKQQAVTDLT KWDCLWITVA WGFLFRILFY ISLLLGSRNK RR

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.