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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40201 Canola cytosol 87.83 97.88
CDX67624 Canola cytosol, peroxisome, plasma membrane 82.13 91.65
CDY02907 Canola cytosol, peroxisome, plasma membrane 70.22 87.24
CDX76121 Canola cytosol 51.2 85.77
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 76.43 85.17
CDX76119 Canola cytosol, peroxisome, plasma membrane 66.03 78.11
CDY65003 Canola cytosol, peroxisome, plasma membrane 68.57 75.77
CDY37656 Canola cytosol, peroxisome, plasma membrane 68.44 75.74
CDX74853 Canola plastid 52.47 67.1
CDY44641 Canola plasma membrane 25.1 66.67
CDX69629 Canola plastid 58.17 63.05
CDY09810 Canola plastid 58.05 60.9
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.32 58.3
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.06 58.0
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 50.06 58.0
GSMUA_Achr5P28450_001 Banana plasma membrane 50.44 57.02
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 50.95 56.94
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 49.94 56.94
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 49.05 56.83
Os05t0120200-01 Rice plasma membrane 50.19 56.65
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 49.81 56.63
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 50.19 56.57
CDX93388 Canola plasma membrane 53.11 56.55
Os05t0120000-00 Rice plasma membrane 48.67 56.47
CDY18451 Canola cytosol, peroxisome, plasma membrane 53.11 56.47
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 47.02 55.54
EES17614 Sorghum cytosol, peroxisome, vacuole 49.3 54.79
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 49.43 54.78
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 46.77 54.67
EES18923 Sorghum cytosol, peroxisome, plasma membrane 49.3 54.48
CDX73549 Canola cytosol, peroxisome, plasma membrane 52.09 54.37
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 46.39 54.22
Zm00001d035553_P001 Maize plasma membrane 48.92 54.06
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 50.7 53.84
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 53.49 53.42
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 50.32 53.29
EER95064 Sorghum cytosol, peroxisome, plasma membrane 53.36 52.89
Os01t0836600-01 Rice plasma membrane 49.94 52.6
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 50.44 52.58
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 50.44 52.58
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 50.19 52.38
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 50.19 52.38
TraesCS3B01G387500.1 Wheat plastid 50.19 52.31
Zm00001d042953_P001 Maize plasma membrane 50.32 52.17
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 51.96 51.77
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 51.96 51.51
Os03t0281900-01 Rice cytosol, plasma membrane 50.95 51.08
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 49.68 49.68
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 52.09 48.87
CDY50899 Canola cytosol 19.52 46.25
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 50.06 43.94
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 34.09 41.01
HORVU5Hr1G021110.1 Barley cytosol 21.8 40.09
HORVU4Hr1G058070.2 Barley cytosol 39.29 38.04
CDY02516 Canola cytosol, peroxisome, plasma membrane 27.5 36.9
CDY59400 Canola cytosol, plasma membrane, plastid 27.12 36.39
CDX76122 Canola plasma membrane 57.41 35.34
CDY02906 Canola plasma membrane 57.54 35.33
CDX93119 Canola cytosol, peroxisome, plasma membrane 26.87 35.04
CDX89610 Canola cytosol, peroxisome, plasma membrane 26.87 35.04
CDY13996 Canola plasma membrane 20.91 34.45
Os03t0282100-00 Rice cytosol, nucleus, plastid 32.95 33.94
CDX94418 Canola plastid 24.46 33.68
CDY27043 Canola plastid 25.1 33.62
CDX92533 Canola plastid 26.74 33.55
CDX89396 Canola plasma membrane 24.33 33.51
CDX96159 Canola plastid 24.59 32.94
CDX96366 Canola cytosol 14.58 31.17
CDY36670 Canola cytosol 14.32 31.13
GSMUA_Achr6P08820_001 Banana plasma membrane 46.51 29.69
CDX92829 Canola plasma membrane 23.19 28.42
CDY48079 Canola plastid 23.83 28.27
CDY29837 Canola plasma membrane 23.07 28.26
CDY51602 Canola plastid 23.57 27.93
CDY49155 Canola cytosol, peroxisome, plasma membrane 22.81 27.73
CDY46506 Canola cytosol, peroxisome, plasma membrane 23.32 27.54
CDX68292 Canola cytosol, peroxisome, plasma membrane 22.69 27.54
CDY50951 Canola cytosol, peroxisome, plastid 22.31 27.46
CDY47690 Canola cytosol, peroxisome, plastid 22.31 27.46
CDY29304 Canola cytosol, peroxisome, plasma membrane 22.05 27.27
CDX72849 Canola cytosol, peroxisome, plasma membrane 23.45 27.13
CDX89252 Canola cytosol, peroxisome, plasma membrane 21.93 27.12
CDX99764 Canola cytosol, peroxisome, plasma membrane 23.45 27.01
CDY03668 Canola plasma membrane 23.19 26.68
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 23.07 26.61
CDY23205 Canola plastid 23.83 25.58
CDX95330 Canola plastid 23.83 25.47
CDX70095 Canola plastid 23.19 25.38
CDY12359 Canola cytosol, nucleus, plasma membrane 9.63 25.25
CDY12299 Canola cytosol, peroxisome, plasma membrane 22.56 25.0
CDY04991 Canola plastid 22.69 24.93
CDY14079 Canola plasma membrane 23.19 24.34
CDX98933 Canola plasma membrane 23.19 24.24
CDY24203 Canola peroxisome 20.53 23.79
CDY43362 Canola cytosol, peroxisome, plasma membrane 20.53 23.79
CDY37372 Canola cytosol, peroxisome, plasma membrane 21.17 22.78
CDY40385 Canola cytosol, peroxisome, plasma membrane 21.17 22.66
CDX96365 Canola plasma membrane 10.27 20.98
CDY36671 Canola plasma membrane 9.13 20.81
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CB15InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX73404ProteinID:CDX73404ProteinID:CDX73404.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00108888001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EF2DEBSEG:seg:::
Description
BnaC08g25990D
Coordinates
chrLK031799:+:180008..186796
Molecular Weight (calculated)
88558.1 Da
IEP (calculated)
9.857
GRAVY (calculated)
0.075
Length
789 amino acids
Sequence
(BLAST)
001: MIFCKKKIEK YRLKRRLQIN RLYCKRRVRA LFVLIPKTEL QICLLAPGKK IIERKTRFPL VQRYFTVSFI SKNTPLSSPV TMPRVSAESQ EISFDGGSEP
101: TLGELLKDFD GGDRKKNSGE DASTHHILDL TSPEIRPVPF LLSFNNLSYD IVHRRRFDFS RGKPASVKTL LNDVSGEACD GDILAVLGAS GAGKSTLIDA
201: LAGRVSSLRG TVTLNGEKIL QTRLLKVISA YVMQDDLLFP MLTVKETLMF ASEFRLPRSL SKSKKMERVQ TLIDQLGLRN AADTIIGDEG HRGVSGGERR
301: RVSIGIDIIH DPILLFLDEP TSGLDSTNAF MVVQVLKRIA RSGSIVIMTI HQPSARVLDL LDRLIILSRG KNVFSGSPTS LPQFLSDFGH PIPEKENITE
401: FALDLVRQLE GSSEGTRELV KFNEKWQQNQ SARATPMTTP YQALSLKESI TASVSRGKLV SGSTSSNPIS MDSVSSYANP PLVETFILAK RYMKNWIRTP
501: ELLGTRIATV MVTGLLLATI YWRLDNTPRG AQERMAFFAF GMSTMFYVCA DNVPVFLQER FIFLRETTRN AYRTSSYVIS HSLVSLPQLL ALSIAFAATT
601: FWTVGLSGGL ESFLYYCLII YAGFWSGSSF VTFVSGLVPN VMISFMITIA YLSYCLLLGG FYINRDRIPV YWIWFHYISL LKYPYEAVLI NEFDDPSRCF
701: VRGVQVFDGT LLAKVPDAMK VKLLDTLSSS LGTTITESTC LRTGPDLLMQ QGISQLSKWD CLWITLAWGL FFRILFYFSL LFGSKNKRT
Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)
001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
Arabidopsis Description
ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.