CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	100.0	100.0
CDY29304	Canola	cytosol, peroxisome, plasma membrane	98.59	98.59
CDX92829	Canola	plasma membrane	91.38	90.53
CDY29837	Canola	plasma membrane	90.75	89.91
AT4G27420.1	Thale cress	cytosol, peroxisome, plasma membrane	82.76	82.76
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.58	66.13
PGSC0003DMT400039671	Potato	plasma membrane	55.17	63.31
PGSC0003DMT400049667	Potato	cytosol, peroxisome, plasma membrane	58.78	61.17
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	57.84	60.2
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.25	60.19
PGSC0003DMT400039676	Potato	plasma membrane	57.52	58.35
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	57.52	58.25
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	54.23	56.26
GSMUA_Achr2P02720_001	Banana	mitochondrion	51.25	54.96
CDY47690	Canola	cytosol, peroxisome, plastid	53.76	53.51
CDY50951	Canola	cytosol, peroxisome, plastid	53.45	53.2
CDY51602	Canola	plastid	55.33	53.0
CDY48079	Canola	plastid	54.7	52.48
CDY46506	Canola	cytosol, peroxisome, plasma membrane	54.7	52.25
CDY49155	Canola	cytosol, peroxisome, plasma membrane	52.98	52.08
CDX99764	Canola	cytosol, peroxisome, plasma membrane	54.39	50.66
KRH20507	Soybean	cytosol	49.37	50.08
CDY12359	Canola	cytosol, nucleus, plasma membrane	22.57	47.84
CDY12299	Canola	cytosol, peroxisome, plasma membrane	53.29	47.75
CDY36670	Canola	cytosol	26.65	46.83
CDX68292	Canola	cytosol, peroxisome, plasma membrane	47.49	46.62
CDX96366	Canola	cytosol	26.8	46.34
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	48.43	45.18
CDY03668	Canola	plasma membrane	48.28	44.9
CDX72849	Canola	cytosol, peroxisome, plasma membrane	47.81	44.72
CDY36671	Canola	plasma membrane	22.73	41.91
CDX70095	Canola	plastid	46.4	41.05
CDY23205	Canola	plastid	47.18	40.95
CDY04991	Canola	plastid	45.92	40.81
CDX96365	Canola	plasma membrane	24.45	40.41
CDX95330	Canola	plastid	46.55	40.24
CDY14079	Canola	plasma membrane	46.71	39.63
CDX98933	Canola	plasma membrane	46.71	39.47
CDY43362	Canola	cytosol, peroxisome, plasma membrane	40.13	37.59
CDY24203	Canola	peroxisome	39.97	37.44
CDX76121	Canola	cytosol	21.79	29.51
CDX93119	Canola	cytosol, peroxisome, plasma membrane	26.49	27.93
CDX89610	Canola	cytosol, peroxisome, plasma membrane	26.33	27.77
CDX94418	Canola	plastid	24.76	27.57
CDY02516	Canola	cytosol, peroxisome, plasma membrane	25.24	27.38
CDX89396	Canola	plasma membrane	24.45	27.23
CDY59400	Canola	cytosol, plasma membrane, plastid	25.08	27.21
CDX92533	Canola	plastid	26.65	27.03
CDX96159	Canola	plastid	24.61	26.66
CDY27043	Canola	plastid	24.45	26.49
CDY50899	Canola	cytosol	13.79	26.43
CDY13996	Canola	plasma membrane	19.75	26.3
CDX74853	Canola	plastid	24.45	25.28
CDX69629	Canola	plastid	28.84	25.27
CDY02907	Canola	cytosol, peroxisome, plasma membrane	25.08	25.2
CDX76119	Canola	cytosol, peroxisome, plasma membrane	25.86	24.74
CDY09810	Canola	plastid	28.84	24.47
CDX67624	Canola	cytosol, peroxisome, plasma membrane	26.96	24.33
CDY40201	Canola	cytosol	26.65	24.01
CDY65003	Canola	cytosol, peroxisome, plasma membrane	26.49	23.67
CDY37656	Canola	cytosol, peroxisome, plasma membrane	26.02	23.28
CDX73549	Canola	cytosol, peroxisome, plasma membrane	27.12	22.88
CDX93388	Canola	plasma membrane	26.18	22.54
CDY37372	Canola	cytosol, peroxisome, plasma membrane	25.71	22.37
CDY40385	Canola	cytosol, peroxisome, plasma membrane	25.71	22.25
CDY18451	Canola	cytosol, peroxisome, plasma membrane	25.86	22.24
CDX73404	Canola	plasma membrane	27.12	21.93
CDY44641	Canola	plasma membrane	7.99	17.17
CDX76122	Canola	plasma membrane	27.9	13.88
CDY02906	Canola	plasma membrane	27.9	13.85

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078DK02	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX89252	ProteinID:CDX89252	ProteinID:CDX89252.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00149454001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF257	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002545B0F	SEG:seg	:	:	:

Description

BnaA01g16410D

Coordinates

chrLK031858:+:483122..485752

Molecular Weight (calculated)

70990.5 Da

IEP (calculated)

8.656

GRAVY (calculated)

0.086

Length

638 amino acids

Sequence
(BLAST)

001: MDNQEVAIDV EAQIENNNDD RTLPFSIFKK ANLPITLKFE NVVYTVKVKE PKSWLSQTKV KTEEMTILKG INGIVKPGEI LAMLGPSGSG KTSLLTALGG
101: RISEGKGKLT GNISYNNKPF SKGVKRATGF VTQDDALYPH LTVTETLVFT ALLRLPNSFK KQEKIKQAEA VVTELGLDRC KNTIIGEPFL RGVSGGERKR
201: VSIGQEILIN PSLLFLDEPT SGLDSTTAQR IVSILWELAR GGRTVVTTIH QPSSRLFYMF DKILLLSEGN PIYFGLGSNA MDYFGSVGYS PSVERINPSD
301: FLLDIANGVG SDELQRPEAL KEALVAVYKT TLLDNVINDL KGQDGHCTQS IESLGDSKHF GDWPTTWWQQ FCVLSERGLK HRRHDSFSGL KIGQVFVVSF
401: LCGLLWWKTD LFHLQDQIGL LFFVSSFWAF FPLFQQIFTF PEERRMLEKE RSSGMYRLSS YFMSRIVGDL PMELILPTIF LIITYWMAGL NPKPANFLLT
501: LLVLLAHVLV SGGLGLALGA LVMDQKTATT LGSVMMLTFL LAGGYYVRHV PVFIAWIKYV SISYYTYKLL ILGQYTENEW YPCGENGNSK CHVGDFEGIK
601: LIGFHSGLAS SFALAAMLVG YRVVAYIALM RIGKTKAG

Best Arabidopsis Sequence Match ( AT4G27420.1 )
(BLAST)

001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG

Arabidopsis Description

ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.