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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95330 Canola plastid 94.69 94.31
CDY04991 Canola plastid 67.62 69.22
CDX70095 Canola plastid 67.76 69.07
KRH32924 Soybean cytosol, peroxisome, plasma membrane, plastid 69.25 68.97
KRH72054 Soybean cytosol, peroxisome, plasma membrane, plastid 69.66 68.91
KRG96304 Soybean cytosol, peroxisome, plasma membrane, plastid 68.84 68.75
KRH68048 Soybean plastid 68.84 68.38
CDY14079 Canola plasma membrane 69.12 67.55
Solyc01g006720.2.1 Tomato plastid 66.53 67.54
CDX98933 Canola plasma membrane 69.12 67.28
PGSC0003DMT400054994 Potato plastid 66.26 67.08
GSMUA_Achr8P04700_001 Banana cytosol, peroxisome, plasma membrane, plastid 64.63 63.84
Bra033441.1-P Field mustard plastid 96.6 62.72
Zm00001d027723_P002 Maize cytosol, nucleus, plasma membrane 63.54 62.02
EER92832 Sorghum plasma membrane 64.35 61.99
TraesCS4D01G271500.1 Wheat plastid 62.45 61.04
Os03t0157400-01 Rice cytosol, peroxisome, plasma membrane 63.95 60.96
HORVU4Hr1G072620.1 Barley plastid 62.72 60.9
TraesCS4B01G272400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 62.72 60.66
TraesCS4A01G032900.1 Wheat plastid 62.59 60.37
GSMUA_Achr1P04620_001 Banana cytosol, peroxisome, plasma membrane, plastid 58.1 59.72
GSMUA_Achr6P23160_001 Banana plastid 59.59 59.59
CDY29304 Canola cytosol, peroxisome, plasma membrane 41.09 47.34
CDX89252 Canola cytosol, peroxisome, plasma membrane 40.95 47.18
CDX92829 Canola plasma membrane 41.09 46.89
CDY29837 Canola plasma membrane 40.68 46.43
CDY50951 Canola cytosol, peroxisome, plastid 40.41 46.33
CDY47690 Canola cytosol, peroxisome, plastid 40.41 46.33
CDY49155 Canola cytosol, peroxisome, plasma membrane 40.68 46.07
CDY51602 Canola plastid 41.22 45.5
CDY46506 Canola cytosol, peroxisome, plasma membrane 41.09 45.21
CDY48079 Canola plastid 40.82 45.11
CDX99764 Canola cytosol, peroxisome, plasma membrane 41.09 44.09
CDX96366 Canola cytosol 21.9 43.63
CDY43362 Canola cytosol, peroxisome, plasma membrane 39.59 42.73
CDX68292 Canola cytosol, peroxisome, plasma membrane 37.69 42.62
CDY24203 Canola peroxisome 39.46 42.58
CDY36670 Canola cytosol 20.95 42.42
CDX72849 Canola cytosol, peroxisome, plasma membrane 38.91 41.94
CDY12299 Canola cytosol, peroxisome, plasma membrane 40.54 41.85
CDY12359 Canola cytosol, nucleus, plasma membrane 16.73 40.86
CDY03668 Canola plasma membrane 37.82 40.52
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 37.55 40.35
CDY36671 Canola plasma membrane 17.82 37.86
CDX96365 Canola plasma membrane 19.18 36.53
CDX76121 Canola cytosol 21.09 32.91
CDX89610 Canola cytosol, peroxisome, plasma membrane 24.9 30.25
CDX93119 Canola cytosol, peroxisome, plasma membrane 24.76 30.08
CDY50899 Canola cytosol 13.61 30.03
CDY02907 Canola cytosol, peroxisome, plasma membrane 25.58 29.61
CDY59400 Canola cytosol, plasma membrane, plastid 22.99 28.74
CDY02516 Canola cytosol, peroxisome, plasma membrane 22.99 28.74
CDX94418 Canola plastid 21.36 27.4
CDX89396 Canola plasma membrane 21.22 27.23
CDX92533 Canola plastid 23.27 27.19
CDX74853 Canola plastid 22.45 26.74
CDY13996 Canola plasma membrane 17.41 26.72
CDX69629 Canola plastid 26.39 26.65
CDX67624 Canola cytosol, peroxisome, plasma membrane 25.31 26.31
CDY40201 Canola cytosol 25.31 26.27
CDY37656 Canola cytosol, peroxisome, plasma membrane 25.31 26.09
CDX76119 Canola cytosol, peroxisome, plasma membrane 23.67 26.09
CDY09810 Canola plastid 26.53 25.93
CDY65003 Canola cytosol, peroxisome, plasma membrane 25.17 25.91
CDY27043 Canola plastid 20.68 25.81
CDX96159 Canola plastid 20.68 25.81
CDX93388 Canola plasma membrane 25.71 25.51
CDY18451 Canola cytosol, peroxisome, plasma membrane 25.58 25.34
CDX73549 Canola cytosol, peroxisome, plasma membrane 25.99 25.26
CDX73404 Canola plasma membrane 25.58 23.83
CDY37372 Canola cytosol, peroxisome, plasma membrane 22.86 22.92
CDY40385 Canola cytosol, peroxisome, plasma membrane 22.86 22.8
CDY44641 Canola plasma membrane 7.48 18.52
CDY02906 Canola plasma membrane 25.85 14.79
CDX76122 Canola plasma membrane 25.58 14.66
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078G9V2UniProt:A0A078G9V2InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY23205ProteinID:CDY23205ProteinID:CDY23205.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00021745001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF286
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE96ABSEG:seg:
Description
BnaA04g05540DBnaA04g05540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9V2]
Coordinates
chrLK032141:+:325368..329911
Molecular Weight (calculated)
81617.2 Da
IEP (calculated)
9.193
GRAVY (calculated)
0.005
Length
735 amino acids
Sequence
(BLAST)
001: MEMGTSSSSS GLVKAKSETL SEALKSSSLD FSNGGGSSHG RKQHVRASSS PSQSGISNYR RNTHIRKART LDLGRLTGGE ALSRASSASL GLSFSFTGFA
101: VPHEEEIIPS ERSCSNDDNL EDIEAATSSV VKLQEEPTFP IYLKFIDITY KVTCKAMTSS SEKSILNGIS GSAYPGEILA LMGPSGSGKT TLLNVLGGRF
201: NQQNTSGSVS YNDKPYSKHL KTRIGFVTQD DVLFPHLTVK ETLTYTALLR LPKTLTKQEK EQRAVSVIQE LGLERCQDTM IGGSFVRGVS GGERKRVCIG
301: NEIMTNPSLL FLDEPTSSLD STTALKIVQM LQSIAKAGKT IVTTIHQPSS RLFHRFDKLV VLSRGSLLYF GKASEAMPYF SSIGCSPLLS MNPAEFLLDL
401: ANGNMNDISI PSALKEGSSC SKIRPPKSTP TAVYEYLEEA YKTQIEVMEK KKLMEPVPLD EEVKLMITCP KREWGLSWWD QYCILSLRGF KERKHDYFSW
501: LRVTQVLSTA IILGLLWWQS DIQHPKGLQD QVGLLFFIAV FWGFFPVFTA IFTFPQERAM LSKERESNMY RLSAYFVART TSDLPLDLIL PVLFLVVVYF
601: MAGLRLRAES FFLSVLTVFL CIVAAQGLGL AIGASLMDLK KATTLASVTV MTFMLAGGYF VKKVPMFIAW IRYMSFNYHT YKLLVKVQYE EIMQDVNGEE
701: IVSGLKEVSA LVAMIIGYRL LAYLSLRRMK LHTST
Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)
001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T
Arabidopsis Description
ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.