Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18451 Canola cytosol, peroxisome, plasma membrane 98.11 97.98
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 85.43 83.84
CDX73549 Canola cytosol, peroxisome, plasma membrane 77.73 76.19
CDY44641 Canola plasma membrane 30.5 76.09
CDX74853 Canola plastid 60.46 72.61
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 70.58 71.06
KRH67592 Soybean plastid 69.64 70.3
KRG95875 Soybean cytosol, peroxisome, plasma membrane 69.37 69.84
CDX69629 Canola plastid 67.34 68.54
Solyc09g005970.1.1 Tomato plasma membrane 66.8 67.07
PGSC0003DMT400061466 Potato plasma membrane 67.07 67.07
CDY09810 Canola plastid 67.34 66.36
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 61.94 65.01
GSMUA_Achr5P28450_001 Banana plasma membrane 59.92 63.61
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 62.62 61.29
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 62.62 61.29
CDY02907 Canola cytosol, peroxisome, plasma membrane 52.36 61.1
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 62.08 60.85
Os05t0120200-01 Rice plasma membrane 57.35 60.8
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 61.94 60.71
TraesCS3B01G387500.1 Wheat plastid 61.94 60.63
CDX76121 Canola cytosol 38.46 60.51
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.47 60.35
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 60.46 60.3
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 60.59 60.27
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.33 60.21
Os05t0120000-00 Rice plasma membrane 55.2 60.15
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 63.83 59.87
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 56.01 59.8
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.93 59.77
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 54.93 59.77
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.74 59.68
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 53.58 59.43
EER95064 Sorghum cytosol, peroxisome, plasma membrane 63.7 59.3
EES18923 Sorghum cytosol, peroxisome, plasma membrane 57.09 59.24
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 63.29 59.22
CDX67624 Canola cytosol, peroxisome, plasma membrane 56.41 59.12
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 63.43 59.05
CDY40201 Canola cytosol 56.41 59.04
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 55.74 59.0
Os01t0836600-01 Rice plasma membrane 59.51 58.88
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 56.28 58.57
Zm00001d042953_P001 Maize plasma membrane 60.05 58.48
EES17614 Sorghum cytosol, peroxisome, vacuole 56.01 58.45
CDX76119 Canola cytosol, peroxisome, plasma membrane 52.5 58.32
Os03t0281900-01 Rice cytosol, plasma membrane 61.67 58.07
Zm00001d035553_P001 Maize plasma membrane 55.6 57.7
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.5 57.63
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 52.23 57.33
CDY65003 Canola cytosol, peroxisome, plasma membrane 54.25 56.3
CDY37656 Canola cytosol, peroxisome, plasma membrane 53.85 55.96
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 63.16 55.65
CDY50899 Canola cytosol 24.29 54.05
CDX73404 Canola plasma membrane 56.55 53.11
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 55.6 52.22
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 61.81 50.95
HORVU4Hr1G058070.2 Barley cytosol 48.04 43.68
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 38.33 43.29
HORVU5Hr1G021110.1 Barley cytosol 23.48 40.56
CDX76122 Canola plasma membrane 64.51 37.29
CDY02906 Canola plasma membrane 64.64 37.28
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.11 35.9
CDY02516 Canola cytosol, peroxisome, plasma membrane 27.8 35.03
CDY13996 Canola plasma membrane 22.4 34.66
CDY59400 Canola cytosol, plasma membrane, plastid 27.4 34.52
CDX89610 Canola cytosol, peroxisome, plasma membrane 28.07 34.38
CDX93119 Canola cytosol, peroxisome, plasma membrane 27.94 34.21
CDX96366 Canola cytosol 16.87 33.88
GSMUA_Achr6P08820_001 Banana plasma membrane 54.25 32.52
CDX94418 Canola plastid 24.97 32.29
CDY27043 Canola plastid 25.64 32.26
CDX89396 Canola plasma membrane 24.83 32.11
CDY36670 Canola cytosol 15.65 31.96
CDX92533 Canola plastid 26.99 31.8
CDX96159 Canola plastid 24.97 31.41
CDX68292 Canola cytosol, peroxisome, plasma membrane 25.1 28.62
CDX72849 Canola cytosol, peroxisome, plasma membrane 25.37 27.57
CDY03668 Canola plasma membrane 25.1 27.11
CDY04991 Canola plastid 26.18 27.02
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 24.83 26.9
CDX70095 Canola plastid 26.05 26.77
CDY47690 Canola cytosol, peroxisome, plastid 23.08 26.68
CDY50951 Canola cytosol, peroxisome, plastid 23.08 26.68
CDY51602 Canola plastid 23.89 26.58
CDX92829 Canola plasma membrane 22.94 26.4
CDY29837 Canola plasma membrane 22.94 26.4
CDY29304 Canola cytosol, peroxisome, plasma membrane 22.67 26.33
CDY46506 Canola cytosol, peroxisome, plasma membrane 23.62 26.2
CDX89252 Canola cytosol, peroxisome, plasma membrane 22.54 26.18
CDY48079 Canola plastid 23.48 26.17
CDY14079 Canola plasma membrane 26.45 26.06
CDY49155 Canola cytosol, peroxisome, plasma membrane 22.81 26.04
CDX95330 Canola plastid 25.64 25.75
CDY23205 Canola plastid 25.51 25.71
CDX98933 Canola plasma membrane 26.05 25.56
CDX99764 Canola cytosol, peroxisome, plasma membrane 23.48 25.4
CDY24203 Canola peroxisome 23.08 25.11
CDY43362 Canola cytosol, peroxisome, plasma membrane 22.94 24.96
CDY12299 Canola cytosol, peroxisome, plasma membrane 22.67 23.6
CDY37372 Canola cytosol, peroxisome, plasma membrane 22.94 23.19
CDY40385 Canola cytosol, peroxisome, plasma membrane 22.94 23.07
CDY12359 Canola cytosol, nucleus, plasma membrane 8.5 20.93
CDY36671 Canola plasma membrane 9.72 20.81
CDX96365 Canola plasma membrane 10.66 20.47
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078E1D1InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX93388ProteinID:CDX93388ProteinID:CDX93388.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00155376001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEFDA1SEG:seg:::
Description
BnaC04g45080D
Coordinates
chrLK031875:+:1482413..1484638
Molecular Weight (calculated)
82106.6 Da
IEP (calculated)
9.487
GRAVY (calculated)
0.141
Length
741 amino acids
Sequence
(BLAST)
001: MSGFLGKLSP AKRVVAGNNN DLPLFYSNSM ERCPSDTPRA TATLGELLMN VEDARNDQRG LEMASPLTSS ASSFNSWTSA PASSITSSPF VLSFTDLTYS
101: VKIKKKFPPF CGNSSSNDSA LNTKILLNGI SGEAHEGEMM AVLGASGSGK STLIDALANR IAKDSLRGSI TLNGEVLESR LQKVISAYVM QDDLLFPMLT
201: VEETLMFSAE FRLPRSLSKK KKKARVQSLI DQLGLRSAAR TMIGDEGHRG VSGGERRRVS IGIDIIHDPI ILFLDEPTSG LDSTSAYMVI KVLQRIAQSG
301: SIVIMSIHQP SYRIMGLLDR LIFLSRGNTV FSGSPTYLPQ FFFEFDHPIP ENENKTEFAL DLIRELENSP EGTKKLVEYH KEWRVKQQAA SRYYNNGITL
401: KEAITASISK GKLVSGATTT NSPSSFQTYA NPFWIEMIVI GKRSILNSMR QPELIGMRIG AVMVTGIILA TMFTKLDNSP KGVQERLGFF AFAMSTTFYT
501: CAEAIPVFLQ ERYIFMRETA YNAYRRSSYV LSQSIISIPS LIFLAACFAA TTFFAVGLAG GASGFLFFFL TILASFWAGS SFVTFLSGVV SNVMLGFTVV
601: VAILAYFLLF SGFFISRDRI PLYWIWFHYL SLVKYPYEGV LQNEFEDTTK CFVRGIQIFD NSPLGQFPNA VKLSLLKSMS GVLGINVTAE TCVTTGIDIL
701: KQQGVTEISK WNCLWITVAW GFFFRVLFYF TLLIGSKNKR R
Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Arabidopsis Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.