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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014776.1-P Field mustard cytosol 99.53 99.38
CDY02906 Canola plasma membrane 97.5 97.28
CDY44641 Canola plasma membrane 20.28 87.54
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 49.61 86.41
CDX74853 Canola plastid 41.03 85.25
CDX69629 Canola plastid 41.19 72.53
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 39.86 70.58
CDY09810 Canola plastid 41.34 70.48
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 40.8 70.01
KRG92984 Soybean cytosol, peroxisome, plasma membrane 40.64 69.47
Solyc05g054890.2.1 Tomato cytosol 40.33 68.93
PGSC0003DMT400029838 Potato extracellular 37.13 68.49
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 38.61 68.37
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 38.22 68.25
Solyc04g010210.1.1 Tomato extracellular 37.44 67.23
CDY02907 Canola cytosol, peroxisome, plasma membrane 32.37 65.35
CDX93388 Canola plasma membrane 37.29 64.51
CDY18451 Canola cytosol, peroxisome, plasma membrane 37.21 64.29
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 35.34 64.16
CDX76121 Canola cytosol 23.48 63.91
GSMUA_Achr5P28450_001 Banana plasma membrane 34.63 63.61
CDX76119 Canola cytosol, peroxisome, plasma membrane 32.84 63.12
CDX67624 Canola cytosol, peroxisome, plasma membrane 34.63 62.8
CDY40201 Canola cytosol 34.4 62.29
Os05t0120200-01 Rice plasma membrane 33.93 62.23
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 33.0 62.11
CDX73549 Canola cytosol, peroxisome, plasma membrane 36.58 62.04
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 35.96 61.88
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.84 61.82
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 35.8 61.78
CDY65003 Canola cytosol, peroxisome, plasma membrane 34.4 61.76
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.76 61.67
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 33.39 61.67
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 37.91 61.52
EES18923 Sorghum cytosol, peroxisome, plasma membrane 34.24 61.48
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 36.27 61.43
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 36.27 61.43
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.61 61.38
CDY37656 Canola cytosol, peroxisome, plasma membrane 34.09 61.29
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 33.07 61.27
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 36.12 61.24
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 36.12 61.24
Os05t0120000-00 Rice plasma membrane 32.45 61.18
Os01t0836600-01 Rice plasma membrane 35.73 61.15
EER95064 Sorghum cytosol, peroxisome, plasma membrane 37.91 61.06
TraesCS3B01G387500.1 Wheat plastid 36.04 61.03
Zm00001d035553_P001 Maize plasma membrane 33.93 60.92
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 33.23 60.86
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 31.59 60.63
Zm00001d042953_P001 Maize plasma membrane 35.88 60.45
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 33.54 60.39
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 37.21 60.23
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 37.29 60.05
EES17614 Sorghum cytosol, peroxisome, vacuole 33.15 59.86
Os03t0281900-01 Rice cytosol, plasma membrane 36.66 59.72
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 30.89 58.67
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 38.07 58.03
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 30.5 57.93
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 35.65 57.92
CDX73404 Canola plasma membrane 35.34 57.41
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 34.63 49.39
CDY50899 Canola cytosol 12.09 46.55
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 23.4 45.73
HORVU4Hr1G058070.2 Barley cytosol 28.78 45.28
HORVU5Hr1G021110.1 Barley cytosol 13.81 41.26
CDY02516 Canola cytosol, peroxisome, plasma membrane 16.54 36.05
Os03t0282100-00 Rice cytosol, nucleus, plastid 21.45 35.9
CDX89610 Canola cytosol, peroxisome, plasma membrane 16.85 35.7
CDY13996 Canola plasma membrane 13.34 35.7
CDX93119 Canola cytosol, peroxisome, plasma membrane 16.77 35.54
CDY59400 Canola cytosol, plasma membrane, plastid 16.22 35.37
CDY27043 Canola plastid 15.83 34.47
CDX96159 Canola plastid 15.68 34.13
CDX94418 Canola plastid 15.21 34.03
CDX89396 Canola plasma membrane 15.13 33.86
CDX96366 Canola cytosol 9.67 33.6
CDX92533 Canola plastid 16.3 33.23
GSMUA_Achr6P08820_001 Banana plasma membrane 31.9 33.09
CDY36670 Canola cytosol 8.97 31.68
CDX68292 Canola cytosol, peroxisome, plasma membrane 14.9 29.38
CDX72849 Canola cytosol, peroxisome, plasma membrane 15.44 29.03
CDY29837 Canola plasma membrane 14.2 28.26
CDX92829 Canola plasma membrane 14.12 28.11
CDY29304 Canola cytosol, peroxisome, plasma membrane 13.96 28.06
CDY47690 Canola cytosol, peroxisome, plastid 13.96 27.93
CDY50951 Canola cytosol, peroxisome, plastid 13.96 27.93
CDX89252 Canola cytosol, peroxisome, plasma membrane 13.88 27.9
CDY03668 Canola plasma membrane 14.9 27.84
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 14.74 27.63
CDY49155 Canola cytosol, peroxisome, plasma membrane 13.81 27.27
CDX70095 Canola plastid 15.21 27.05
CDY04991 Canola plastid 15.05 26.88
CDY51602 Canola plastid 13.96 26.88
CDY48079 Canola plastid 13.88 26.77
CDY46506 Canola cytosol, peroxisome, plasma membrane 13.65 26.2
CDY14079 Canola plasma membrane 15.21 25.93
CDY24203 Canola peroxisome 13.73 25.84
CDY43362 Canola cytosol, peroxisome, plasma membrane 13.73 25.84
CDX98933 Canola plasma membrane 15.13 25.7
CDY23205 Canola plastid 14.66 25.58
CDX95330 Canola plastid 14.59 25.34
CDX99764 Canola cytosol, peroxisome, plasma membrane 13.42 25.11
CDY12299 Canola cytosol, peroxisome, plasma membrane 13.81 24.86
CDY37372 Canola cytosol, peroxisome, plasma membrane 13.34 23.33
CDY40385 Canola cytosol, peroxisome, plasma membrane 13.34 23.2
CDY36671 Canola plasma membrane 6.24 23.12
CDX96365 Canola plasma membrane 6.79 22.54
CDY12359 Canola cytosol, nucleus, plasma membrane 5.23 22.26
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078CHA8InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX76122ProteinID:CDX76122ProteinID:CDX76122.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00126404001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EEDAE9SEG:seg:::
Description
BnaA04g03860D
Coordinates
chrLK031806:+:1089407..1097097
Molecular Weight (calculated)
143016.0 Da
IEP (calculated)
9.316
GRAVY (calculated)
0.097
Length
1282 amino acids
Sequence
(BLAST)
0001: MLQQDAVISV HSPETRPLPL VLAFNDLTYK VTLPRRFGFR SRRSPAQVKT LLNGITGETN EGEILAILGA SGSGKSTLID ALAGRISEGS LKGTVTLNGE
0101: ALQSRMLQVI SAYVMQDDLL FPMLTVQETL MFAAEFRLPR SLPKSKKRDR VETLIDQLGL RTVKNTMIGD EGHRGVSGGE RRRVSIGTDI IHDPIVLFLD
0201: EPTSGLDSTC AFMVVQVLKK IACSGSIVVM SIHQPSCRIM EFLDRLLVLS SGQCVFSDSP ATLPLFFSEF GRPIPDKENN AEFTLDLIKD LEGTSGGTSR
0301: LVEFNRSWQQ KKLRGSQEPH HNSSPLRETI NASITRGKLV TTSYNSKASY VNPWWVETLI LAKRYMINWT RTPELIGTRV FIVMMTGFLL ATVYWRVDDS
0401: PRGVQERLSF FSFAMATMFY SCADGLPTFI QERYIFMRET AHNAYRRSSY VISHSLVTLP HLFALSVGFA ATTFWFVGLN GGLAGFIYYL LIIFASFWSG
0501: CSFVTFVSGV IPNVMMSYMV TFGYLSYCLL FSGFYINRDR IHLYWIWIHY ISLLKYPYEA VLHNEFDDPS LSEDHSVDNA TPYHSMEIGS SLTLGQLLKN
0601: VSDVRKVDAG DETPLHSSQG DQDYDDLMRP VPFVLSFNNL TYNVSVRRKF NLIPRRSLSS SKTKTLLDNI SGETRDGEIL AVLGASGSGK STLIDALANR
0701: IAKGSLKGKV TLNGEPLQSR TLKVISAYVM QDDLLFPMLT VEETLMFAAE FRLPRSLPKS KKKLRVQTLI EQLGIKNAAN TIIGDEGHRG ISGGERRRVS
0801: IGIDIIHDPI VLFLDEPTSG LDSTSAFMVV NVLKKIAESG SIVIMSIHQP SHRVLGLLNR LIFLSRGKTV FSGSPASLPG FFARFGSPVP ENENQTEFAL
0901: DLIRELEGSA GGTRGLVEFN KRWQEMKNRS PPASPNPNLT LKEAISASIS RGKLVSGGGG GSSVVSHGGF ANPFWIEIKT LTERSILNSR RQPELFGTRL
1001: AAVLVTGFIL ATVFWRLDNS PKGVQERLGF FAFAMSTMFY TCADALPVFL QERYIFMRET AYNAYRRSSY VLSHAVVSLP SLVFLSLAFA STTFWAVGLE
1101: GGPMGFLFYC LIIFASFWSG SSFVTFLSGV VPHVMLGYTI VVAILAYFLL FSGFFINRDR IPQYWLWFHY LSLVKYPYEA VLQNEFSDPM ECFVRGVQMF
1201: DNTPLGQLSY GMKLRLLDSV SRSIGMRITS STCLTTGADI LRQQGVTELS KWSCLLVTVG FGFFFRALFY LCLLFGSKNK RR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.