CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002234.1-P	Field mustard	cytosol	73.93	96.88
CDY13996	Canola	plasma membrane	73.61	96.66
AT5G19410.2	Thale cress	plastid	87.12	86.57
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.07	64.27
KRH50602	Soybean	plastid	65.66	63.05
KRG89682	Soybean	cytosol, nucleus, peroxisome	65.5	62.8
PGSC0003DMT400062852	Potato	plastid	65.18	62.03
Solyc03g113690.1.1	Tomato	plastid	64.07	61.25
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	55.96	60.17
TraesCS1D01G240600.1	Wheat	plasma membrane	54.53	52.53
HORVU1Hr1G056890.2	Barley	cytosol	54.53	52.37
TraesCS1B01G252600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	54.21	52.22
TraesCS1A01G240500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	53.9	51.83
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	53.9	48.85
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	53.42	48.14
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	49.76	46.37
CDX89396	Canola	plasma membrane	39.9	43.8
CDX94418	Canola	plastid	39.9	43.8
CDY27043	Canola	plastid	40.86	43.63
CDX96159	Canola	plastid	40.54	43.29
CDY59400	Canola	cytosol, plasma membrane, plastid	38.47	41.16
CDY02516	Canola	cytosol, peroxisome, plasma membrane	38.47	41.16
CDX93119	Canola	cytosol, peroxisome, plasma membrane	39.27	40.83
CDX89610	Canola	cytosol, peroxisome, plasma membrane	39.11	40.66
CDY44641	Canola	plasma membrane	15.1	31.99
CDX76121	Canola	cytosol	23.69	31.63
CDX74853	Canola	plastid	31.0	31.6
CDY02907	Canola	cytosol, peroxisome, plasma membrane	31.8	31.5
CDY36670	Canola	cytosol	17.81	30.85
CDX96366	Canola	cytosol	17.49	29.81
CDY40201	Canola	cytosol	32.91	29.24
CDX76119	Canola	cytosol, peroxisome, plasma membrane	30.68	28.94
CDX67624	Canola	cytosol, peroxisome, plasma membrane	32.27	28.71
CDX69629	Canola	plastid	32.59	28.16
CDY65003	Canola	cytosol, peroxisome, plasma membrane	31.96	28.15
CDY37656	Canola	cytosol, peroxisome, plasma membrane	31.48	27.77
CDX73549	Canola	cytosol, peroxisome, plasma membrane	33.23	27.65
CDX92829	Canola	plasma membrane	27.98	27.33
CDY09810	Canola	plastid	32.59	27.26
CDY29837	Canola	plasma membrane	27.82	27.17
CDX93388	Canola	plasma membrane	31.8	26.99
CDY46506	Canola	cytosol, peroxisome, plasma membrane	28.62	26.95
CDY18451	Canola	cytosol, peroxisome, plasma membrane	31.64	26.82
CDY29304	Canola	cytosol, peroxisome, plasma membrane	27.19	26.8
CDX73404	Canola	plasma membrane	33.55	26.74
CDX89252	Canola	cytosol, peroxisome, plasma membrane	27.03	26.65
CDX68292	Canola	cytosol, peroxisome, plasma membrane	27.5	26.62
CDY51602	Canola	plastid	27.82	26.28
CDY48079	Canola	plastid	27.66	26.17
CDY50951	Canola	cytosol, peroxisome, plastid	26.55	26.05
CDX99764	Canola	cytosol, peroxisome, plasma membrane	28.3	25.99
CDY47690	Canola	cytosol, peroxisome, plastid	26.39	25.9
CDY50899	Canola	cytosol	13.51	25.53
CDY49155	Canola	cytosol, peroxisome, plasma membrane	26.23	25.42
CDX72849	Canola	cytosol, peroxisome, plasma membrane	27.5	25.37
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	27.03	24.85
CDY03668	Canola	plasma membrane	26.87	24.64
CDY12359	Canola	cytosol, nucleus, plasma membrane	11.45	23.92
CDY43362	Canola	cytosol, peroxisome, plasma membrane	25.6	23.64
CDY24203	Canola	peroxisome	25.6	23.64
CDY04991	Canola	plastid	26.71	23.4
CDY23205	Canola	plastid	27.19	23.27
CDX95330	Canola	plastid	26.87	22.9
CDY12299	Canola	cytosol, peroxisome, plasma membrane	25.91	22.89
CDX70095	Canola	plastid	26.23	22.88
CDY14079	Canola	plasma membrane	27.03	22.61
CDX98933	Canola	plasma membrane	26.87	22.38
CDY37372	Canola	cytosol, peroxisome, plasma membrane	24.64	21.15
CDY40385	Canola	cytosol, peroxisome, plasma membrane	24.64	21.03
CDY36671	Canola	plasma membrane	10.81	19.65
CDX96365	Canola	plasma membrane	11.76	19.17
CDX76122	Canola	plasma membrane	33.23	16.3
CDY02906	Canola	plasma membrane	32.91	16.11

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078DZ45	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX92533	ProteinID:CDX92533	ProteinID:CDX92533.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00154315001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF158	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0004EEDA88	SEG:seg	:	:	:

Description

BnaA10g15720D

Coordinates

chrLK031872:+:1092963..1094852

Molecular Weight (calculated)

70704.9 Da

IEP (calculated)

8.235

GRAVY (calculated)

0.104

Length

629 amino acids

Sequence
(BLAST)

001: MNNTHTMASC FHPPPSMTTN RREEDSIILF SSSNSPDEYS SASSSSSSSP LPTPNRYSLT VANLSYTIHH VTILKSVTFT TQPSKLLAVV GPSGTGKSTL
101: LKIISGRVSH KALDPSSTIL INNGRISNNN QLRRLCGFVP QDDDLLPLLT VKETLMYSAK FSLRDSTAKE KEERVDTLLR DLGLVLVQDS FVGEGDEEDR
201: GVSGGERKRV SIAVEMIRDP PILLLDEPTS GLDSRNSLQV VELLANMAKT KQRTVVFSIH QPSYRILDYI SDYLILSRGS VIHFGNLEHL EDSIAKLGFQ
301: IPEQLNPIEF AMEIVDSLRD SNSSRSLLSS LSIENENDNT IARKQEFRSL FDVAEISFLC SRFCKIIYRT KQLFLARTMQ AVVAGLGLGS VYTRLKRDEE
401: GVAERLGLFA FSLSFLLSST VEALPIYLRE RRVLMKEASR GSYRISSYMI ANTIAFVPFL FVVSLLFSIP VYWIVGLNPS VHAFSFFVLC VWLIILMASS
501: LVLFLSAVAP DFISGNSLIC TVLGAFFLFS GYFIPKEKIP KPWMFMYYVS LYRYPLESML VNEYWSLRKE CFSGGDMGCL MTGEDVLRKR GLDKDTRWIN
601: VGIMLAFFVF YRFLCWGMLL RKSCSKTTL

Best Arabidopsis Sequence Match ( AT5G19410.2 )
(BLAST)

001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH

Arabidopsis Description

ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.