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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, peroxisome, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51602 Canola plastid 96.09 95.95
Bra025152.1-P Field mustard plastid 69.47 93.33
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 92.18 91.22
CDY46506 Canola cytosol, peroxisome, plasma membrane 89.92 89.52
CDX99764 Canola cytosol, peroxisome, plasma membrane 89.17 86.57
VIT_01s0011g02730.t01 Wine grape cytosol, peroxisome, plasma membrane 68.27 67.16
Solyc04g006960.2.1 Tomato cytosol, nucleus, peroxisome 66.02 65.04
KRG92003 Soybean cytosol 66.32 64.66
KRH34780 Soybean cytosol, peroxisome, plasma membrane 66.47 64.62
PGSC0003DMT400019318 Potato cytosol, nucleus, peroxisome 65.56 64.59
KRH75541 Soybean cytosol, peroxisome, plasma membrane, plastid 65.26 64.01
KRH37571 Soybean cytosol, peroxisome, plasma membrane, plastid 59.1 63.08
KRH71117 Soybean cytosol, peroxisome, plasma membrane, plastid 64.51 62.72
CDY47690 Canola cytosol, peroxisome, plastid 55.49 57.57
CDY50951 Canola cytosol, peroxisome, plastid 55.49 57.57
CDY49155 Canola cytosol, peroxisome, plasma membrane 56.09 57.47
CDY29304 Canola cytosol, peroxisome, plasma membrane 52.63 54.86
CDX89252 Canola cytosol, peroxisome, plasma membrane 52.48 54.7
CDY29837 Canola plasma membrane 52.63 54.35
CDX92829 Canola plasma membrane 52.33 54.04
CDY12359 Canola cytosol, nucleus, plasma membrane 23.91 52.82
CDY12299 Canola cytosol, peroxisome, plasma membrane 55.94 52.25
CDX68292 Canola cytosol, peroxisome, plasma membrane 45.11 46.15
CDY36670 Canola cytosol 24.81 45.45
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 46.32 45.03
CDY03668 Canola plasma membrane 46.17 44.75
CDX72849 Canola cytosol, peroxisome, plasma membrane 45.71 44.57
CDX96366 Canola cytosol 24.51 44.17
CDY36671 Canola plasma membrane 22.26 42.77
CDX96365 Canola plasma membrane 23.91 41.19
CDY23205 Canola plastid 45.11 40.82
CDX95330 Canola plastid 44.36 39.97
CDY04991 Canola plastid 42.86 39.69
CDX70095 Canola plastid 43.01 39.67
CDY14079 Canola plasma membrane 43.16 38.16
CDX98933 Canola plasma membrane 42.86 37.75
CDY43362 Canola cytosol, peroxisome, plasma membrane 37.74 36.86
CDY24203 Canola peroxisome 37.74 36.86
CDX93119 Canola cytosol, peroxisome, plasma membrane 27.52 30.25
CDX89610 Canola cytosol, peroxisome, plasma membrane 27.52 30.25
CDX76121 Canola cytosol 20.6 29.09
CDY13996 Canola plasma membrane 20.15 27.97
CDY59400 Canola cytosol, plasma membrane, plastid 24.66 27.89
CDY02516 Canola cytosol, peroxisome, plasma membrane 24.66 27.89
CDX92533 Canola plastid 26.17 27.66
CDY02907 Canola cytosol, peroxisome, plasma membrane 25.86 27.09
CDX94418 Canola plastid 23.16 26.88
CDX74853 Canola plastid 24.66 26.58
CDX89396 Canola plasma membrane 22.86 26.53
CDX69629 Canola plastid 29.02 26.51
CDY27043 Canola plastid 23.31 26.32
CDX96159 Canola plastid 23.16 26.15
CDY50899 Canola cytosol 13.08 26.13
CDX67624 Canola cytosol, peroxisome, plasma membrane 27.67 26.03
CDY40201 Canola cytosol 27.67 25.99
CDY09810 Canola plastid 29.02 25.66
CDY65003 Canola cytosol, peroxisome, plasma membrane 27.22 25.35
CDX76119 Canola cytosol, peroxisome, plasma membrane 25.41 25.34
CDY37656 Canola cytosol, peroxisome, plasma membrane 27.07 25.25
CDY37372 Canola cytosol, peroxisome, plasma membrane 27.82 25.24
CDY40385 Canola cytosol, peroxisome, plasma membrane 27.82 25.1
CDX73549 Canola cytosol, peroxisome, plasma membrane 28.12 24.74
CDX73404 Canola plasma membrane 28.27 23.83
CDY18451 Canola cytosol, peroxisome, plasma membrane 26.32 23.58
CDX93388 Canola plasma membrane 26.17 23.48
CDY44641 Canola plasma membrane 8.42 18.86
CDY02906 Canola plasma membrane 27.07 14.01
CDX76122 Canola plasma membrane 26.77 13.88
Protein Annotations
MapMan:11.4.4.1MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078IFJ4UniProt:A0A078IFJ4InterPro:AAA+_ATPase
InterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDY48079ProteinID:CDY48079ProteinID:CDY48079.1
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00088755001
InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF303SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EDF6C8
SEG:seg:::::
Description
BnaA06g33490DBnaA06g33490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFJ4]
Coordinates
chrLK032752:-:111705..114329
Molecular Weight (calculated)
74049.1 Da
IEP (calculated)
9.559
GRAVY (calculated)
0.037
Length
665 amino acids
Sequence
(BLAST)
001: MPPNEQESSF PKTPGANQSV TSPVQETRFS SPSHVIPCHG GPSHQSRQSS VLCQSLRPII LKFEELTYSI TSPTGKRSYW FGSQEPKPNR FVLNGVSGIV
101: KPGELLAMLG PSGSGKTTLV TALAGRLHGK LSGTVSYNGE PFTSAVKRKT GFVTQEDVLY PHLTVMETLT YTALLRLPKE LTRKEKIEQT ETVVSDLGLN
201: RCSNSVIGGG LVRGISGGER KRVGIGQEML VNPSLLLLDE PTSGLDSTTA ARIVATLRTL ARGGRTVVTT IHQPSSRLYR MFDKVLVLSE GSPIYSGDSG
301: RVMEYFGSIG FQPGSSFVNP ADFVLDLANG ITSDTKQHDQ VDINGRLDRL EEQNSVKQSL ISSYKNNLYP PLKEEVSRTY PQDQTANGSR AKSLTNRWPT
401: SWWMQFSVLL KRGLKERSHE SFSGLRIFMV MSVSILSGLL WWHSRVAHIQ DQVGLLFFFS IFWGFFPLFN AVFTFPQERP MLIKERSSGI YRLSSYYIAR
501: IVGDLPMELI LPTIFVTITY WMGGLKPSLT TFLLTLMIVL YNVLVAQGVG LALGAILMDA KKAATFSSVL MLVFLLAGGY YIQHIPGFIA WLKYISFSHY
601: CYKLLVGVQY TWDEVYECGP GLHCSVMDYE GIKNLRIGYM MWDVLALALM LFLYRVLAYL ALRNL
Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)
001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL
Arabidopsis Description
ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.