Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002234.1-P | Field mustard | cytosol | 98.12 | 97.92 |
| CDX92533 | Canola | plastid | 96.66 | 73.61 |
| AT5G19410.2 | Thale cress | plastid | 89.14 | 67.46 |
| VIT_06s0009g03380.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 67.43 | 51.52 |
| KRG89682 | Soybean | cytosol, nucleus, peroxisome | 69.31 | 50.61 |
| KRH50602 | Soybean | plastid | 68.89 | 50.38 |
| PGSC0003DMT400062852 | Potato | plastid | 67.85 | 49.17 |
| Solyc03g113690.1.1 | Tomato | plastid | 66.6 | 48.48 |
| GSMUA_Achr2P06780_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 59.08 | 48.38 |
| HORVU1Hr1G056890.2 | Barley | cytosol | 57.83 | 42.29 |
| TraesCS1D01G240600.1 | Wheat | plasma membrane | 57.62 | 42.27 |
| TraesCS1B01G252600.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 57.41 | 42.11 |
| TraesCS1A01G240500.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 57.41 | 42.05 |
| Zm00001d038068_P001 | Maize | cytosol, peroxisome, plasma membrane | 56.37 | 38.9 |
| KXG21900 | Sorghum | cytosol, peroxisome, plasma membrane | 55.95 | 38.4 |
| Os05t0384600-01 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 52.19 | 37.04 |
| CDX89396 | Canola | plasma membrane | 43.84 | 36.65 |
| CDX94418 | Canola | plastid | 43.84 | 36.65 |
| CDY27043 | Canola | plastid | 44.89 | 36.5 |
| CDX96159 | Canola | plastid | 44.47 | 36.16 |
| CDX93119 | Canola | cytosol, peroxisome, plasma membrane | 43.84 | 34.71 |
| CDX89610 | Canola | cytosol, peroxisome, plasma membrane | 43.63 | 34.55 |
| CDY59400 | Canola | cytosol, plasma membrane, plastid | 41.75 | 34.01 |
| CDY02516 | Canola | cytosol, peroxisome, plasma membrane | 41.75 | 34.01 |
| CDY44641 | Canola | plasma membrane | 20.04 | 32.32 |
| CDX74853 | Canola | plastid | 35.28 | 27.39 |
| CDY02907 | Canola | cytosol, peroxisome, plasma membrane | 33.19 | 25.04 |
| CDY12359 | Canola | cytosol, nucleus, plasma membrane | 15.03 | 23.92 |
| CDX76119 | Canola | cytosol, peroxisome, plasma membrane | 32.78 | 23.54 |
| CDX69629 | Canola | plastid | 35.7 | 23.49 |
| CDY40201 | Canola | cytosol | 34.45 | 23.31 |
| CDX73549 | Canola | cytosol, peroxisome, plasma membrane | 36.74 | 23.28 |
| CDX67624 | Canola | cytosol, peroxisome, plasma membrane | 34.03 | 23.06 |
| CDX76121 | Canola | cytosol | 22.55 | 22.93 |
| CDY65003 | Canola | cytosol, peroxisome, plasma membrane | 34.03 | 22.83 |
| CDY09810 | Canola | plastid | 35.7 | 22.74 |
| CDY37656 | Canola | cytosol, peroxisome, plasma membrane | 33.61 | 22.58 |
| CDX93388 | Canola | plasma membrane | 34.66 | 22.4 |
| CDY18451 | Canola | cytosol, peroxisome, plasma membrane | 34.24 | 22.1 |
| CDX73404 | Canola | plasma membrane | 34.45 | 20.91 |
| CDY51602 | Canola | plastid | 28.39 | 20.42 |
| CDY46506 | Canola | cytosol, peroxisome, plasma membrane | 28.39 | 20.36 |
| CDX92829 | Canola | plasma membrane | 27.14 | 20.19 |
| CDX68292 | Canola | cytosol, peroxisome, plasma membrane | 27.35 | 20.15 |
| CDY48079 | Canola | plastid | 27.97 | 20.15 |
| CDY29837 | Canola | plasma membrane | 26.93 | 20.03 |
| CDX89252 | Canola | cytosol, peroxisome, plasma membrane | 26.3 | 19.75 |
| CDY29304 | Canola | cytosol, peroxisome, plasma membrane | 26.3 | 19.75 |
| CDX99764 | Canola | cytosol, peroxisome, plasma membrane | 28.18 | 19.71 |
| CDY50951 | Canola | cytosol, peroxisome, plastid | 26.3 | 19.66 |
| CDY36670 | Canola | cytosol | 14.82 | 19.56 |
| CDY47690 | Canola | cytosol, peroxisome, plastid | 26.1 | 19.5 |
| CDY36671 | Canola | plasma membrane | 13.99 | 19.36 |
| CDY50899 | Canola | cytosol | 13.36 | 19.22 |
| CDX72849 | Canola | cytosol, peroxisome, plasma membrane | 27.35 | 19.21 |
| CDY49155 | Canola | cytosol, peroxisome, plasma membrane | 25.89 | 19.11 |
| CDX82199 | Canola | cytosol, peroxisome, plasma membrane, plastid | 26.51 | 18.57 |
| CDX96366 | Canola | cytosol | 13.99 | 18.16 |
| CDY03668 | Canola | plasma membrane | 25.89 | 18.08 |
| CDY04991 | Canola | plastid | 26.93 | 17.97 |
| CDX70095 | Canola | plastid | 26.72 | 17.75 |
| CDX96365 | Canola | plasma membrane | 14.2 | 17.62 |
| CDY23205 | Canola | plastid | 26.72 | 17.41 |
| CDY12299 | Canola | cytosol, peroxisome, plasma membrane | 25.68 | 17.28 |
| CDX95330 | Canola | plastid | 26.3 | 17.07 |
| CDY43362 | Canola | cytosol, peroxisome, plasma membrane | 24.22 | 17.03 |
| CDY24203 | Canola | peroxisome | 24.22 | 17.03 |
| CDY14079 | Canola | plasma membrane | 26.72 | 17.02 |
| CDX98933 | Canola | plasma membrane | 26.72 | 16.95 |
| CDY37372 | Canola | cytosol, peroxisome, plasma membrane | 25.05 | 16.37 |
| CDY40385 | Canola | cytosol, peroxisome, plasma membrane | 25.05 | 16.28 |
| CDX76122 | Canola | plasma membrane | 35.7 | 13.34 |
| CDY02906 | Canola | plasma membrane | 35.28 | 13.15 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078FLM5 | UniProt:A0A078FLM5 | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| EnsemblPlants:CDY13996 | ProteinID:CDY13996 | ProteinID:CDY13996.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00078513001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 |
| PANTHER:PTHR19241 | PANTHER:PTHR19241:SF158 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0004EE5E57 | SEG:seg |
Description
BnaC09g38300DBnaC09g38300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLM5]
Coordinates
chrLK032039:-:740476..741915
Molecular Weight (calculated)
54414.3 Da
IEP (calculated)
7.000
GRAVY (calculated)
0.190
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSAKFSLRD STAKDKEERV ETLLRDLGLV LVQDSFVGEG DEEDRGVSGG ERKRVSIAVE MIRDPPILLL DEPTSGLDSR NSLQVVELLA NMAKTKQRTV
101: VFSIHQPSYR ILDHISDYLI LSRGSVIHFG NLEHLEDSIA KLGFQIPEQL NPIEFAMEIV DSLRDSNQTD SSRSLLSSSS ASIENENDDT IAKKQEFRSL
201: FDVAEISFLC SRFCKIIYRT KQLFLARTMQ AVVAGLGLGS VYTRLKRDEE GVAERLGLFA FSLSFLLSST VEALPIYLRE RRVLMKETSR GSYRISSYMI
301: ANTIAFVPFL FVVSLLFSIP VYWIVGLNPS VHAFSFFVLC VWLIILMASS LVLFLSAVAP DFISGNSLIC TVLGAFFLFS GYFIPKEKIP KPWMFMYYVS
401: LYRYPLESML VNEYWSLRKE CFSGGDMGCL LTGEDVLRKR GLDKDTRWIN VGIMLAFFVF YRFLCWGILL RKSYSKSTL
101: VFSIHQPSYR ILDHISDYLI LSRGSVIHFG NLEHLEDSIA KLGFQIPEQL NPIEFAMEIV DSLRDSNQTD SSRSLLSSSS ASIENENDDT IAKKQEFRSL
201: FDVAEISFLC SRFCKIIYRT KQLFLARTMQ AVVAGLGLGS VYTRLKRDEE GVAERLGLFA FSLSFLLSST VEALPIYLRE RRVLMKETSR GSYRISSYMI
301: ANTIAFVPFL FVVSLLFSIP VYWIVGLNPS VHAFSFFVLC VWLIILMASS LVLFLSAVAP DFISGNSLIC TVLGAFFLFS GYFIPKEKIP KPWMFMYYVS
401: LYRYPLESML VNEYWSLRKE CFSGGDMGCL LTGEDVLRKR GLDKDTRWIN VGIMLAFFVF YRFLCWGILL RKSYSKSTL
001: MKKNNNTHTM ASCFHPSAMA TSHREEDSII LFSASNSPDE FSSASSSFSS SPLPTPNRYS LTVTNLSYTI NHTPILNSVS LAAESSKILA VVGPSGTGKS
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH
101: TLLKIISGRV NHKALDPSSA VLMNNRKITD YNQLRRLCGF VPQDDDLLPL LTVKETLMYS AKFSLRDSTA KEREERVESL LSDLGLVLVQ DSFVGEGDEE
201: DRGVSGGERK RVSIAVEMIR DPPILLLDEP TSGLDSRNSL QVVELLATMA KSKQRTVLFS IHQPSYRILD YISDYLILSR GSVIHLGSLE HLEDSIAKLG
301: FQIPEQLNPI EFAMEIVESL RTFKPNSVAV VESSSMWPEN NENDGIISKK EAFRVLDVTE ISYLCSRFCK IIYRTKQLFL ARTMQAVVAG LGLGSVYTRL
401: KRDEEGVAER LGLFAFSLSF LLSSTVEALP IYLRERRVLM KESSRGSYRI SSYMIANTIA FVPFLFVVSL LFSIPVYWIV GLNPSIQAFS FFVLCVWLII
501: LMASSLVLFL SAVSPDFISG NSLICTVLGA FFLFSGYFIP KEKIPKPWMF MYYVSLYRYP LESMVVNEYW SMREECFSSG NMGCLMTGED VLKERGLDKD
601: TRWINVGIML AFFVFYRILC WGILLRKASK STH
Arabidopsis Description
ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.