Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89396 | Canola | plasma membrane | 97.73 | 97.73 |
| AT4G25750.1 | Thale cress | plasma membrane | 87.26 | 86.66 |
| CDY27043 | Canola | plastid | 80.98 | 78.78 |
| CDX96159 | Canola | plastid | 79.93 | 77.76 |
| KRH35226 | Soybean | cytosol, mitochondrion, plasma membrane | 58.29 | 71.06 |
| VIT_16s0050g01620.t01 | Wine grape | cytosol | 72.95 | 70.02 |
| Solyc03g007690.1.1 | Tomato | plastid | 69.63 | 66.83 |
| PGSC0003DMT400053843 | Potato | cytosol, plasma membrane, plastid | 69.28 | 66.61 |
| KRG91599 | Soybean | cytosol, plastid | 65.62 | 65.85 |
| GSMUA_Achr7P10690_001 | Banana | cytosol | 49.21 | 60.52 |
| GSMUA_Achr6P05760_001 | Banana | cytosol, nucleus, plastid | 57.24 | 58.68 |
| Os06t0503100-01 | Rice | cytosol, peroxisome, plasma membrane | 46.95 | 55.35 |
| Zm00001d044895_P001 | Maize | cytosol, peroxisome, plasma membrane | 58.12 | 53.88 |
| EES14035 | Sorghum | cytosol, peroxisome, plasma membrane | 58.12 | 52.69 |
| HORVU7Hr1G081250.1 | Barley | mitochondrion | 58.12 | 50.45 |
| TraesCS7A01G342000.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 57.94 | 50.15 |
| TraesCS7D01G337600.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.94 | 50.15 |
| TraesCS7B01G240900.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.59 | 49.85 |
| CDY13996 | Canola | plasma membrane | 36.65 | 43.84 |
| CDY02516 | Canola | cytosol, peroxisome, plasma membrane | 43.28 | 42.18 |
| CDY59400 | Canola | cytosol, plasma membrane, plastid | 42.93 | 41.84 |
| CDX89610 | Canola | cytosol, peroxisome, plasma membrane | 42.76 | 40.5 |
| CDX93119 | Canola | cytosol, peroxisome, plasma membrane | 42.58 | 40.33 |
| CDX92533 | Canola | plastid | 43.8 | 39.9 |
| CDY02907 | Canola | cytosol, peroxisome, plasma membrane | 34.03 | 30.71 |
| CDX76121 | Canola | cytosol | 24.96 | 30.36 |
| CDX74853 | Canola | plastid | 32.11 | 29.82 |
| CDY44641 | Canola | plasma membrane | 14.49 | 27.95 |
| CDX76119 | Canola | cytosol, peroxisome, plasma membrane | 31.41 | 26.99 |
| CDY40201 | Canola | cytosol | 33.33 | 26.98 |
| CDX67624 | Canola | cytosol, peroxisome, plasma membrane | 32.98 | 26.73 |
| CDX69629 | Canola | plastid | 33.51 | 26.37 |
| CDX96366 | Canola | cytosol | 16.93 | 26.29 |
| CDY65003 | Canola | cytosol, peroxisome, plasma membrane | 31.94 | 25.63 |
| CDY36670 | Canola | cytosol | 16.23 | 25.62 |
| CDY09810 | Canola | plastid | 33.51 | 25.53 |
| CDX73549 | Canola | cytosol, peroxisome, plasma membrane | 33.68 | 25.53 |
| CDY37656 | Canola | cytosol, peroxisome, plasma membrane | 31.76 | 25.53 |
| CDY18451 | Canola | cytosol, peroxisome, plasma membrane | 32.46 | 25.07 |
| CDX93388 | Canola | plasma membrane | 32.29 | 24.97 |
| CDY29304 | Canola | cytosol, peroxisome, plasma membrane | 27.75 | 24.92 |
| CDX89252 | Canola | cytosol, peroxisome, plasma membrane | 27.57 | 24.76 |
| CDY12359 | Canola | cytosol, nucleus, plasma membrane | 12.91 | 24.58 |
| CDX73404 | Canola | plasma membrane | 33.68 | 24.46 |
| CDX92829 | Canola | plasma membrane | 27.4 | 24.38 |
| CDY29837 | Canola | plasma membrane | 27.23 | 24.22 |
| CDY50951 | Canola | cytosol, peroxisome, plastid | 26.88 | 24.02 |
| CDY47690 | Canola | cytosol, peroxisome, plastid | 26.88 | 24.02 |
| CDY46506 | Canola | cytosol, peroxisome, plasma membrane | 27.92 | 23.95 |
| CDY49155 | Canola | cytosol, peroxisome, plasma membrane | 26.88 | 23.73 |
| CDY50899 | Canola | cytosol | 13.79 | 23.72 |
| CDY51602 | Canola | plastid | 27.23 | 23.42 |
| CDX99764 | Canola | cytosol, peroxisome, plasma membrane | 27.92 | 23.36 |
| CDY48079 | Canola | plastid | 26.88 | 23.16 |
| CDX68292 | Canola | cytosol, peroxisome, plasma membrane | 25.65 | 22.62 |
| CDY03668 | Canola | plasma membrane | 26.7 | 22.3 |
| CDX72849 | Canola | cytosol, peroxisome, plasma membrane | 26.53 | 22.29 |
| CDX82199 | Canola | cytosol, peroxisome, plasma membrane, plastid | 26.18 | 21.93 |
| CDY12299 | Canola | cytosol, peroxisome, plasma membrane | 27.05 | 21.77 |
| CDY24203 | Canola | peroxisome | 25.83 | 21.73 |
| CDY43362 | Canola | cytosol, peroxisome, plasma membrane | 25.83 | 21.73 |
| CDY04991 | Canola | plastid | 27.23 | 21.73 |
| CDY23205 | Canola | plastid | 27.4 | 21.36 |
| CDX70095 | Canola | plastid | 26.88 | 21.36 |
| CDX95330 | Canola | plastid | 27.05 | 21.0 |
| CDY14079 | Canola | plasma membrane | 27.4 | 20.88 |
| CDX98933 | Canola | plasma membrane | 27.23 | 20.66 |
| CDY37372 | Canola | cytosol, peroxisome, plasma membrane | 25.65 | 20.05 |
| CDY40385 | Canola | cytosol, peroxisome, plasma membrane | 25.65 | 19.95 |
| CDY36671 | Canola | plasma membrane | 10.65 | 17.63 |
| CDX96365 | Canola | plasma membrane | 11.69 | 17.36 |
| CDY02906 | Canola | plasma membrane | 34.21 | 15.25 |
| CDX76122 | Canola | plasma membrane | 34.03 | 15.21 |
Protein Annotations
| MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | GO:A0A078E4Q9 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | EnsemblPlants:CDX94418 | ProteinID:CDX94418 | ProteinID:CDX94418.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0016887 | EnsemblPlantsGene:GSBRNA2T00157560001 | InterPro:IPR003439 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 |
| ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF290 | SMART:SM00382 | SUPFAM:SSF52540 |
| TMHMM:TMhelix | UniParc:UPI0004EEF29B | SEG:seg | : | : | : |
Description
BnaC01g17660D
Coordinates
chrLK031881:+:1070458..1072179
Molecular Weight (calculated)
63874.6 Da
IEP (calculated)
9.566
GRAVY (calculated)
0.400
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNTLTTSS ISYTKPLPPL FPTAEPPSYI LRNISLTSHP SQILAIVGPS GAGKSTLLDI LAARTSPTSG SILVNSLPIN PSSYRKISSY VPQHDAFFPL
101: LTVSETFTFS ASLLLSKTPL ETSNAVASLL QELNLTHLAH TRLAQGLSGG ERRRVSIGLS LLHDPGFLLL DEPTSGLDSK SAFDVVQILK SVATSRQRTV
201: ILSIHQPSFK ILFLIDRLLL LSKGTVVYHG RLDLLEGFLL SKGFTVPPQL NSLEYAMEIL QNLHDPHENA DIVLPGPQEP QKQNTKQSYR SSRITEVTLL
301: SKRFLKIIYR TRQLLLTNIL EALIVGLVLG TIYLNIGTGK AGIEKRFGLF AFTLTFLLSS TTQTLPIFID ERPILLRETS SGLYRLSSHI LANTLVFLPY
401: LLLIAIIYSV SLYFLVGLCL SWQAFAYFVL VIWIIVLMAN SFVLFLSSLA PNYIAGTSLV TVLLAAFFLF SGYFISKESL PKYWLFMYFF SMYKYALDSL
501: LINEYSCLAN KCLVWFGEGD VKGCLLTGGD VLEKKGLDER QRWTNVYVLL GFFVLYRLLC FLVLLKRVSS SRR
101: LTVSETFTFS ASLLLSKTPL ETSNAVASLL QELNLTHLAH TRLAQGLSGG ERRRVSIGLS LLHDPGFLLL DEPTSGLDSK SAFDVVQILK SVATSRQRTV
201: ILSIHQPSFK ILFLIDRLLL LSKGTVVYHG RLDLLEGFLL SKGFTVPPQL NSLEYAMEIL QNLHDPHENA DIVLPGPQEP QKQNTKQSYR SSRITEVTLL
301: SKRFLKIIYR TRQLLLTNIL EALIVGLVLG TIYLNIGTGK AGIEKRFGLF AFTLTFLLSS TTQTLPIFID ERPILLRETS SGLYRLSSHI LANTLVFLPY
401: LLLIAIIYSV SLYFLVGLCL SWQAFAYFVL VIWIIVLMAN SFVLFLSSLA PNYIAGTSLV TVLLAAFFLF SGYFISKESL PKYWLFMYFF SMYKYALDSL
501: LINEYSCLAN KCLVWFGEGD VKGCLLTGGD VLEKKGLDER QRWTNVYVLL GFFVLYRLLC FLVLLKRVSS SRR
001: MESYTLSTSS ISYAKPLSPL LLTAEQPSFI LRNITLTSHP SQILAIIGPS GAGKSTLLDI LAARTSPTSG SILLNSVLIN PSSYRKISSY VPQHDTFFPL
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR
Arabidopsis Description
ABCG4ABC transporter G family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW08]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.