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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76122 Canola plasma membrane 97.28 97.5
CDY44641 Canola plasma membrane 20.16 87.21
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 49.65 86.68
CDX74853 Canola plastid 40.93 85.25
CDX69629 Canola plastid 40.93 72.25
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 39.84 70.72
CDY09810 Canola plastid 41.09 70.21
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 40.78 70.15
KRG92984 Soybean cytosol, peroxisome, plasma membrane 40.62 69.6
Solyc05g054890.2.1 Tomato cytosol 40.31 69.07
PGSC0003DMT400029838 Potato extracellular 37.12 68.63
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 38.6 68.51
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 38.21 68.38
Solyc04g010210.1.1 Tomato extracellular 37.28 67.09
CDY02907 Canola cytosol, peroxisome, plasma membrane 32.22 65.2
CDX93388 Canola plasma membrane 37.28 64.64
CDY18451 Canola cytosol, peroxisome, plasma membrane 37.2 64.42
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 35.18 64.02
CDX76121 Canola cytosol 23.35 63.69
CDX76119 Canola cytosol, peroxisome, plasma membrane 32.68 62.97
CDX67624 Canola cytosol, peroxisome, plasma membrane 34.55 62.8
GSMUA_Achr5P28450_001 Banana plasma membrane 34.09 62.75
CDY40201 Canola cytosol 34.32 62.29
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 32.92 62.11
Os05t0120200-01 Rice plasma membrane 33.7 61.95
CDX73549 Canola cytosol, peroxisome, plasma membrane 36.34 61.77
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.68 61.67
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.61 61.53
CDY65003 Canola cytosol, peroxisome, plasma membrane 34.16 61.48
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 35.49 61.37
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 32.45 61.23
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 35.49 61.21
CDY37656 Canola cytosol, peroxisome, plasma membrane 33.93 61.15
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 37.59 61.14
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 33.0 61.1
EES18923 Sorghum cytosol, peroxisome, plasma membrane 33.85 60.92
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 35.88 60.9
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 35.88 60.9
Os05t0120000-00 Rice plasma membrane 32.22 60.88
Os01t0836600-01 Rice plasma membrane 35.41 60.75
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 35.72 60.71
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 35.72 60.71
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 32.68 60.69
Zm00001d035553_P001 Maize plasma membrane 33.7 60.64
EER95064 Sorghum cytosol, peroxisome, plasma membrane 37.51 60.55
TraesCS3B01G387500.1 Wheat plastid 35.64 60.5
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 31.44 60.48
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 37.2 60.35
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 32.84 60.29
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 37.28 60.18
Zm00001d042953_P001 Maize plasma membrane 35.56 60.05
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 33.15 59.83
EES17614 Sorghum cytosol, peroxisome, vacuole 33.0 59.72
Os03t0281900-01 Rice cytosol, plasma membrane 36.34 59.34
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 30.66 58.37
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 38.13 58.26
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 30.35 57.78
CDX73404 Canola plasma membrane 35.33 57.54
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 35.18 57.29
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 34.55 49.39
CDY50899 Canola cytosol 12.06 46.55
HORVU4Hr1G058070.2 Barley cytosol 28.72 45.28
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 23.04 45.12
HORVU5Hr1G021110.1 Barley cytosol 13.85 41.49
CDY02516 Canola cytosol, peroxisome, plasma membrane 16.73 36.56
CDX89610 Canola cytosol, peroxisome, plasma membrane 16.96 36.03
CDY59400 Canola cytosol, plasma membrane, plastid 16.42 35.88
CDX93119 Canola cytosol, peroxisome, plasma membrane 16.89 35.87
Os03t0282100-00 Rice cytosol, nucleus, plastid 21.32 35.77
CDY13996 Canola plasma membrane 13.15 35.28
CDY27043 Canola plastid 15.88 34.63
CDX96159 Canola plastid 15.72 34.3
CDX94418 Canola plastid 15.25 34.21
CDX89396 Canola plasma membrane 15.18 34.03
CDX96366 Canola cytosol 9.65 33.6
GSMUA_Achr6P08820_001 Banana plasma membrane 31.83 33.09
CDX92533 Canola plastid 16.11 32.91
CDY36670 Canola cytosol 8.95 31.68
CDX68292 Canola cytosol, peroxisome, plasma membrane 14.86 29.38
CDX72849 Canola cytosol, peroxisome, plasma membrane 15.41 29.03
CDY29837 Canola plasma membrane 14.24 28.42
CDX92829 Canola plasma membrane 14.16 28.26
CDY29304 Canola cytosol, peroxisome, plasma membrane 13.93 28.06
CDY03668 Canola plasma membrane 14.94 27.99
CDY47690 Canola cytosol, peroxisome, plastid 13.93 27.93
CDY50951 Canola cytosol, peroxisome, plastid 13.93 27.93
CDX89252 Canola cytosol, peroxisome, plasma membrane 13.85 27.9
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 14.79 27.78
CDY49155 Canola cytosol, peroxisome, plasma membrane 13.77 27.27
CDX70095 Canola plastid 15.25 27.18
CDY51602 Canola plastid 14.09 27.18
CDY48079 Canola plastid 14.01 27.07
CDY04991 Canola plastid 15.1 27.02
CDY46506 Canola cytosol, peroxisome, plasma membrane 13.62 26.2
CDY14079 Canola plasma membrane 15.25 26.06
CDY23205 Canola plastid 14.79 25.85
CDY24203 Canola peroxisome 13.7 25.84
CDY43362 Canola cytosol, peroxisome, plasma membrane 13.7 25.84
CDX98933 Canola plasma membrane 15.18 25.83
CDX95330 Canola plastid 14.63 25.47
CDX99764 Canola cytosol, peroxisome, plasma membrane 13.39 25.11
CDY12299 Canola cytosol, peroxisome, plasma membrane 13.77 24.86
CDY37372 Canola cytosol, peroxisome, plasma membrane 13.39 23.47
CDY40385 Canola cytosol, peroxisome, plasma membrane 13.39 23.34
CDY36671 Canola plasma membrane 6.23 23.12
CDX96365 Canola plasma membrane 6.85 22.8
CDY12359 Canola cytosol, nucleus, plasma membrane 5.21 22.26
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078EP16InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDY02906ProteinID:CDY02906ProteinID:CDY02906.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00115144001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EE7711SEG:seg:::
Description
BnaC04g25800D
Coordinates
chrLK031938:-:258750..265058
Molecular Weight (calculated)
143357.0 Da
IEP (calculated)
9.247
GRAVY (calculated)
0.102
Length
1285 amino acids
Sequence
(BLAST)
0001: MLQQDAVINV DLPETRPIPL LSLAFNDLTY KVTLPRRFGF RSRRSPAQVK TLLNGITGET KEGEILAILG ASGSGKSTLI DALAGRISEG SLKGTVTLNG
0101: EALQSRVLQV ISAYVMQDDL LFPMLTVQET LMFAAEFRLP RSLPKSKKRD RVETLIDQLG LRTVKNTMIG DEGHRGVSGG ERRRVSIGTD IIHDPIVLFL
0201: DEPTSGLDST SAFMVVQVLK KIACSGSIVF MSIHQPSCRI MEFLDRLLVL SSGQCVFSDS PATLPLFFSE FGRPIPDKEN NAEFTLDLIK DLEGSSEGAR
0301: RLVEFNRSWQ QKKLRGSQEP HHNSSPLIET INASITRGKL VTTSYNSKAS YVNPWWVETL ILAKRYMINW TRTPELIGTR VFIVMMTGFL LATVYWRVDD
0401: SPRGVQERLS FFSFAMATMF YSCADGLPAF IQERYIFMRE TAHNAYRRSS YVISHSLVTL PHLFALSVGF AATTFWFVGL NGGIAGFIYY LLIIFASFWS
0501: GCSFVTFVSG VIPNVMMSYM VTFGYLSYCL LFSGFYINRD RIHLYWIWIH YISLLKYPYE AVLHNEFDDP SRSEDHSADN TTPYHSMEIG SSLTLGQLLK
0601: NVSDVRKVDV GDETPLHSSQ GDQDYDDLMR PVPFVLSFNN LTYNVSVRRK FDLIPRRSLS SSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN
0701: RIAKGSLKGK VTLNGEPLQS RTLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK SKKKLRVQTL IEQLGIKNAA NTIIGDEGHR GISGGERRRV
0801: SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VNVLKKIAES GSIVIMSIHQ PSHRVLGLLN RLIFLSRGKT VFSGSPASLP GFFARFGSPV PENENQTEFA
0901: LDLIRELEGS AGGTRGLVEF NKRWQEMKNL SPPASPNPNL TLKEAISASI SRGKLVSGGG GGGGSSVASH GGFANPFWIE IKTLTERSIL NSRRQPELFG
1001: TRLVTVLITG FILATVFWRL DNSPKGVQER LGFFAFAMST MFYTCADALP VFLQERYIFM RETAYNAYRR SSYVLSHAVV SLPSLIFLSL AFAATTFWAV
1101: GLEGGPMGFL FYCLIIFASF WSGSSFVTFL SGVVPHVMLG YTIVVAILAY FLLFSGFFIN RDRIPQYWLW FHYLSLVKYP YEAVLQNEFS DPMECFVRGV
1201: QMFDNTPLGQ LSYGMKLRLL DSVSRSIGMR ITGSTCLTTG ADILKQQGVT ELSKWSCLLV TIGFGFFFRV LFYLCLLFGS KNKRR
Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Arabidopsis Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.