CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022614.1-P	Field mustard	plastid	97.28	97.28
CDY27043	Canola	plastid	96.94	96.94
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	89.81	89.81
CDX94418	Canola	plastid	77.76	79.93
CDX89396	Canola	plasma membrane	76.91	79.06
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	57.56	72.13
VIT_16s0050g01620.t01	Wine grape	cytosol	70.12	69.18
Solyc03g007690.1.1	Tomato	plastid	68.08	67.17
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	67.74	66.95
KRG91599	Soybean	cytosol, plastid	64.86	66.9
GSMUA_Achr7P10690_001	Banana	cytosol	47.88	60.52
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	54.67	57.6
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	44.14	53.5
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	55.52	52.91
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	55.18	51.42
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	54.84	48.79
HORVU7Hr1G081250.1	Barley	mitochondrion	54.67	48.79
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	54.67	48.64
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	54.5	48.49
CDY13996	Canola	plasma membrane	36.16	44.47
CDY02516	Canola	cytosol, peroxisome, plasma membrane	41.77	41.84
CDY59400	Canola	cytosol, plasma membrane, plastid	41.43	41.5
CDX92533	Canola	plastid	43.29	40.54
CDX93119	Canola	cytosol, peroxisome, plasma membrane	40.58	39.5
CDX89610	Canola	cytosol, peroxisome, plasma membrane	40.58	39.5
CDY02907	Canola	cytosol, peroxisome, plasma membrane	32.94	30.55
CDX74853	Canola	plastid	31.41	29.98
CDX76121	Canola	cytosol	23.94	29.94
CDY44641	Canola	plasma membrane	14.26	28.28
CDX76119	Canola	cytosol, peroxisome, plasma membrane	31.24	27.59
CDY40201	Canola	cytosol	32.6	27.12
CDX96366	Canola	cytosol	16.98	27.1
CDY36670	Canola	cytosol	16.64	27.0
CDX67624	Canola	cytosol, peroxisome, plasma membrane	32.26	26.87
CDX69629	Canola	plastid	33.11	26.79
CDY65003	Canola	cytosol, peroxisome, plasma membrane	32.09	26.47
CDY37656	Canola	cytosol, peroxisome, plasma membrane	31.75	26.23
CDY09810	Canola	plastid	33.11	25.93
CDX73549	Canola	cytosol, peroxisome, plasma membrane	32.94	25.66
CDY18451	Canola	cytosol, peroxisome, plasma membrane	31.58	25.07
CDX93388	Canola	plasma membrane	31.41	24.97
CDX89252	Canola	cytosol, peroxisome, plasma membrane	26.66	24.61
CDX73404	Canola	plasma membrane	32.94	24.59
CDY29304	Canola	cytosol, peroxisome, plasma membrane	26.49	24.45
CDX92829	Canola	plasma membrane	26.66	24.38
CDY50951	Canola	cytosol, peroxisome, plastid	26.49	24.34
CDY29837	Canola	plasma membrane	26.49	24.22
CDY47690	Canola	cytosol, peroxisome, plastid	26.32	24.18
CDY49155	Canola	cytosol, peroxisome, plasma membrane	26.15	23.73
CDY46506	Canola	cytosol, peroxisome, plasma membrane	26.83	23.65
CDX68292	Canola	cytosol, peroxisome, plasma membrane	25.98	23.54
CDY50899	Canola	cytosol	13.24	23.42
CDY51602	Canola	plastid	26.32	23.27
CDY12359	Canola	cytosol, nucleus, plasma membrane	11.88	23.26
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	26.99	23.25
CDY03668	Canola	plasma membrane	26.99	23.18
CDX72849	Canola	cytosol, peroxisome, plasma membrane	26.83	23.17
CDY48079	Canola	plastid	26.15	23.16
CDX99764	Canola	cytosol, peroxisome, plasma membrane	26.66	22.92
CDY43362	Canola	cytosol, peroxisome, plasma membrane	25.81	22.32
CDY24203	Canola	peroxisome	25.81	22.32
CDY12299	Canola	cytosol, peroxisome, plasma membrane	26.32	21.77
CDY04991	Canola	plastid	25.98	21.31
CDX70095	Canola	plastid	25.47	20.8
CDY23205	Canola	plastid	25.81	20.68
CDY14079	Canola	plasma membrane	26.15	20.48
CDX95330	Canola	plastid	25.64	20.46
CDY37372	Canola	cytosol, peroxisome, plasma membrane	24.96	20.05
CDX98933	Canola	plasma membrane	25.64	20.0
CDY40385	Canola	cytosol, peroxisome, plasma membrane	24.96	19.95
CDX96365	Canola	plasma membrane	12.05	18.39
CDY36671	Canola	plasma membrane	10.36	17.63
CDY02906	Canola	plasma membrane	34.3	15.72
CDX76122	Canola	plasma membrane	34.13	15.68

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078E675	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDX96159	ProteinID:CDX96159	ProteinID:CDX96159.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00102223001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004EDF697	SEG:seg	:	:

Description

BnaC02g14920D

Coordinates

chrLK031893:-:93017..94786

Molecular Weight (calculated)

65696.5 Da

IEP (calculated)

9.482

GRAVY (calculated)

0.340

Length

589 amino acids

Sequence
(BLAST)

001: MKTPPPQSSE TKAYTLTTSS VSYTQPKTSL SLLRLAATEP PSFILRNITL TAHPSEILAV VGPSGAGKST LLDILASKTS PTSGSILLNS VPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAARLLLP NPSDVPQTVT SLLSELNLTH LSNTRLAQGL SGGERRRVSI GLTLLHDPCF LLLDEPTSGL DSKSAFDVVN
201: ILKSIAMSRQ RTVVLSIHQP SFKILSIIDR LLLISQGTVA YHGRLDSLEG FLLSKGFTVP PQLNSLEYAM EVLQQLRESD GNTDVIALHS IENQKERQEQ
301: SIVRYRKSRI TEICLLSLRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKEGIE KRFGLFAFTL TFLLSSTTET LPIFINERPI LIRETSSGVY
401: RLSSHILANT LVFLPYLFVI SIIYSASVYF LVGLCPTWQA FGYFVLAIWV VVLMANSFVL FLSSLAPNYI AGTSSVTVLL AAFFLFSGYF ISKESLPKYW
501: LFMYFISMYK YALDALLINE YSCLASKCLV WYEEAQGKVC LVNGGDVLEK KGLHEKHRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Best Arabidopsis Sequence Match ( AT5G52860.1 )
(BLAST)

001: MEIPPSPPPE TAAYTLTTSS ISYTIPKTSL SLLRFPATEP PSFILRNITL TAHPTEILAV VGPSGAGKST LLDILASKTS PTSGSILLNS IPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAACLLLP NPSIVSETVT SLLSELNLTH LSHTRLAQGL SGGERRRVSI GLSLLHDPCF LLLDEPTSGL DSKSAFDVIH
201: ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSKGTVV YHGRLDSLEG FLLFKGFTVP PQLNSLEYAM EILQELRESD GNTDATALPS IENRKQREKQ
301: SIVRYRKSRI TEISLLARRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKAGIE KRFGMFAFTL TFLLSSTTET LPIFINERPI LLRETSSGIY
401: RLSSHILANT LVFLPYLFVI SIIYSVSVYF LIGLCPTWQA FGYFVLVIWI ILLMANSFVL FLSSLAPNYI TGTSLVTILL AAFFLFSGYF ISKESLPKYW
501: LFMYFFSMYK YALDALLINE YSCLASKCLV WLEEAQTKIC MVTGGDVLKK KGLHEKQRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Arabidopsis Description

ABCG8ABC transporter G family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX5]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.