Factsheet for Bra022614.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27043	Canola	plastid	98.98	98.98
CDX96159	Canola	plastid	97.28	97.28
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	90.83	90.83
Bra013916.1-P	Field mustard	plastid	77.76	79.93
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	58.91	73.83
VIT_16s0050g01620.t01	Wine grape	cytosol	70.97	70.02
KRG91599	Soybean	cytosol, plastid	65.7	67.78
Solyc03g007690.1.1	Tomato	plastid	68.59	67.67
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	68.25	67.45
GSMUA_Achr7P10690_001	Banana	cytosol	48.39	61.16
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	54.84	57.78
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	44.48	53.91
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	55.52	52.91
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	55.52	51.74
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	55.01	48.94
HORVU7Hr1G081250.1	Barley	mitochondrion	54.84	48.94
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	54.84	48.79
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	54.67	48.64
Bra002234.1-P	Field mustard	cytosol	36.33	44.58
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.6	41.67
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.92	38.13
Bra005051.1-P	Field mustard	plastid	31.58	30.29
Bra005049.1-P	Field mustard	plasma membrane	14.43	28.62
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.28	28.04
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.11	27.54
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.6	27.16
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	33.45	27.14
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.92	26.48
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.09	26.43
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.28	26.34
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.92	25.34
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.83	24.76
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	26.49	24.34
Bra019051.1-P	Field mustard	plasma membrane	26.32	24.33
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.16	24.21
Bra007999.1-P	Field mustard	plasma membrane	26.83	23.98
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.32	23.85
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.83	23.65
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.81	22.32
Bra014774.1-P	Field mustard	plasma membrane	23.94	22.27
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.15	21.18
Bra025152.1-P	Field mustard	plastid	17.66	21.01
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.62	20.93
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.15	20.48
Bra009203.1-P	Field mustard	plasma membrane	25.64	20.0
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.96	19.95
Bra014776.1-P	Field mustard	cytosol	34.3	15.73
Bra033441.1-P	Field mustard	plastid	25.13	13.07

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra022614	EnsemblPlants:Bra022614.1	EnsemblPlants:Bra022614.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	UniProt:M4E1G6	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002546DF2	SEG:seg	:	:

Description

AT5G52860 (E=7e-272) | ABC transporter family protein

Coordinates

chrA02:+:8526394..8528163

Molecular Weight (calculated)

65719.6 Da

IEP (calculated)

9.557

GRAVY (calculated)

0.354

Length

589 amino acids

Sequence
(BLAST)

001: MKTPPPQSSE TKAYTLTTSS VSYTQPKTSL SLLRLAATEP PSFILRNITL TAHPSEILAV VGPSGAGKSP LLDILASKTS PTSGSILLNS VPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAARLLLP NPSDVPQTVS SLLSELNLTH LSNTRLAQGL SGGERRRVSI GLTLLHDPCF LLLDEPTSGL DSKSAFDVVN
201: ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSQGTVA YHGRLDSLEG FLLSKGFTVP PQLNSLEYAM EVLQELRESD GNTDVITLPS TENRIERQKQ
301: SIVRYRKSRI TEICLLSLRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKEGIE KRFGLFAFTL TFLLSSTTET LPIFINERPI LLRETSSGVY
401: RLSSHILANT LVFLPYLFVI SIIYSASVYF LVGLCPTWQA FGYFVLVIWV IVLMANSFVL FLSSLAPNYI AGTSLVTVLL AAFFLFSGYF ISKESLPKYW
501: LFMYFISMYK YALDALLINE YSCLASKCLV WYEEAQGKVC LVNGGDVLEK KGLHEKHRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Best Arabidopsis Sequence Match ( AT5G52860.1 )
(BLAST)

001: MEIPPSPPPE TAAYTLTTSS ISYTIPKTSL SLLRFPATEP PSFILRNITL TAHPTEILAV VGPSGAGKST LLDILASKTS PTSGSILLNS IPINPSSYRK
101: ISSYVPQHDS FFPLLTVSET FSFAACLLLP NPSIVSETVT SLLSELNLTH LSHTRLAQGL SGGERRRVSI GLSLLHDPCF LLLDEPTSGL DSKSAFDVIH
201: ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSKGTVV YHGRLDSLEG FLLFKGFTVP PQLNSLEYAM EILQELRESD GNTDATALPS IENRKQREKQ
301: SIVRYRKSRI TEISLLARRF WKIIYRTRQL LLTNALEALV VGLVLGTIYI NIGIGKAGIE KRFGMFAFTL TFLLSSTTET LPIFINERPI LLRETSSGIY
401: RLSSHILANT LVFLPYLFVI SIIYSVSVYF LIGLCPTWQA FGYFVLVIWI ILLMANSFVL FLSSLAPNYI TGTSLVTILL AAFFLFSGYF ISKESLPKYW
501: LFMYFFSMYK YALDALLINE YSCLASKCLV WLEEAQTKIC MVTGGDVLKK KGLHEKQRWF NVYVLLGFFV LYRVLCFLAL LRRVSGSKR

Arabidopsis Description

ABCG8ABC transporter G family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLX5]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.