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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40201 Canola cytosol 99.01 99.01
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 90.68 90.81
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 85.73 86.84
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 84.6 84.6
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 76.27 76.06
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 75.0 74.27
Bra005051.1-P Field mustard plastid 58.05 66.94
Bra005049.1-P Field mustard plasma membrane 27.26 64.98
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 64.41 62.81
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 62.15 59.14
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.79 58.0
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.51 57.71
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 55.51 57.71
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 56.5 56.66
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 55.37 56.65
GSMUA_Achr5P28450_001 Banana plasma membrane 55.79 56.59
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 54.38 56.53
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 55.23 56.34
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 59.04 56.33
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 55.65 56.29
Os05t0120200-01 Rice plasma membrane 55.51 56.22
Os05t0120000-00 Rice plasma membrane 53.53 55.74
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 51.98 55.09
EES17614 Sorghum cytosol, peroxisome, vacuole 54.52 54.37
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 54.66 54.35
Bra014774.1-P Field mustard plasma membrane 48.59 54.34
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 51.69 54.22
EES18923 Sorghum cytosol, peroxisome, plasma membrane 54.52 54.06
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 51.27 53.78
Zm00001d035553_P001 Maize plasma membrane 54.1 53.64
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 56.21 53.57
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 59.6 53.42
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 56.07 53.29
EER95064 Sorghum cytosol, peroxisome, plasma membrane 59.46 52.89
Os01t0836600-01 Rice plasma membrane 55.51 52.47
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 56.07 52.44
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 56.07 52.44
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 55.65 52.12
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 55.65 52.12
TraesCS3B01G387500.1 Wheat plastid 55.65 52.05
Zm00001d042953_P001 Maize plasma membrane 55.79 51.91
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 57.91 51.77
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 57.91 51.51
Os03t0281900-01 Rice cytosol, plasma membrane 56.64 50.95
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 54.8 49.18
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 57.91 48.75
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 58.62 43.87
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 55.37 43.6
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 37.71 40.7
HORVU5Hr1G021110.1 Barley cytosol 24.29 40.09
HORVU4Hr1G058070.2 Barley cytosol 43.79 38.04
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 30.37 36.56
Bra014776.1-P Field mustard cytosol 62.43 34.42
Bra002234.1-P Field mustard cytosol 23.16 34.17
Os03t0282100-00 Rice cytosol, nucleus, plastid 36.72 33.94
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 29.66 33.23
Bra013916.1-P Field mustard plastid 26.84 33.16
Bra022614.1-P Field mustard plastid 27.54 33.11
GSMUA_Achr6P08820_001 Banana plasma membrane 51.13 29.29
Bra019051.1-P Field mustard plasma membrane 25.0 27.79
Bra007999.1-P Field mustard plasma membrane 25.57 27.47
Bra003903.1-P Field mustard cytosol, peroxisome, plasma membrane 25.14 27.38
Bra016095.1-P Field mustard cytosol, peroxisome, plasma membrane 25.57 27.38
Bra026514.1-P Field mustard cytosol, peroxisome, plasma membrane 25.57 27.1
Bra033878.1-P Field mustard cytosol, peroxisome, plastid 24.43 26.99
Bra026352.1-P Field mustard cytosol, peroxisome, plasma membrane 24.29 26.96
Bra025152.1-P Field mustard plastid 18.79 26.87
Bra009203.1-P Field mustard plasma membrane 25.99 24.37
Bra023202.1-P Field mustard cytosol, peroxisome, plasma membrane 25.0 24.35
Bra028729.1-P Field mustard cytosol, peroxisome, plasma membrane 25.28 23.8
Bra039378.1-P Field mustard cytosol, peroxisome, plasma membrane 22.74 23.64
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 23.73 22.8
Bra033441.1-P Field mustard plastid 26.27 16.43
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra007141EnsemblPlants:Bra007141.1EnsemblPlants:Bra007141.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887InterPro:IPR003439UniProt:M4CSE9InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF180SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0002542A20SEG:seg:::
Description
AT3G55110 (E=1e-312) | ABC transporter family protein
Coordinates
chrA09:-:27527907..27530142
Molecular Weight (calculated)
78875.6 Da
IEP (calculated)
8.050
GRAVY (calculated)
0.113
Length
708 amino acids
Sequence
(BLAST)
001: MPRVSAESQE ISFDGGSEPT LGELLKDFDV GDRKKTSGED ASTHHILDLT SPETRPVPFL LSFNNLSYDI VHRRRFDFSR GKPASVKTLL NDVSGEACDG
101: DILAVLGASG AGKSTLIDAL AGRVSSLRGT VTLNGEKILQ TRLLKVISAY VMQDDLLFPM LTVKETLMFA SEFRLPRSLS KSKKMERVQT LIDKLGLRNA
201: ADTIIGDEGH RGVSGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTNAFM VVQVLKRIAR SGSIVIMTIH QPSARVLDLL DRLIILSRGE NVFSGSPTSL
301: PQFLSDFGHP IPEKENITEF ALDLVRQLEG SSEGTRELVE FNEKWQQNHS ARATPMTTPY QALSLKESIT ASVSRGKLVS GSTSSDPISM DSVSSYANPP
401: LVETFILAKR YMKNWIRTPE LIGTRIATVM VTGLLLATIY WRLDNTPRGA QERMAFFAFG MSTMFYVCAD NVPVFLKERF IFLRESTRNA YRISSYVISH
501: SLVSLPQLLA LSIAFAATTF WTVGLSGGLE SFLYYCLIIY AGFWSGSSFV TFVSGLVPNV MISFMITIAY LSYCLLLGGF YINRDRIPVY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV RGVQVFDGTL LAKVPDAMKV KLLDTLSSSL GTTITESTCL RTGPDLLMQQ GISQLSKWDC LWITLAWGLF FRILFYFSLL
701: FGSKNKRT
Best Arabidopsis Sequence Match ( AT3G55110.1 )
(BLAST)
001: MPRVSAEILD ISHTGGNESP TLGELLKDFN DSGRKKYPGE NAPTQHILDL APAAETRSVP FLLSFNNLSY NVVLRRRFDF SRRKTASVKT LLDDITGEAR
101: DGEILAVLGG SGAGKSTLID ALAGRVAEDS LKGTVTLNGE KVLQSRLLKV ISAYVMQDDL LFPMLTVKET LMFASEFRLP RSLPKSKKME RVETLIDQLG
201: LRNAADTVIG DEGHRGVSGG ERRRVSIGID IIHDPILLFL DEPTSGLDST NAFMVVQVLK RIAQSGSVVI MSIHQPSARI IGLLDRLIIL SHGKSVFNGS
301: PVSLPSFFSS FGRPIPEKEN ITEFALDVIR ELEGSSEGTR DLVEFNEKWQ QNQTARATTQ SRVSLKEAIA ASVSRGKLVS GSSGANPISM ETVSSYANPP
401: LAETFILAKR YIKNWIRTPE LIGMRIGTVM VTGLLLATVY WRLDNTPRGA QERMGFFAFG MSTMFYCCAD NIPVFIQERY IFLRETTHNA YRTSSYVISH
501: ALVSLPQLLA LSIAFAATTF WTVGLSGGLE SFFYYCLIIY AAFWSGSSIV TFISGLIPNV MMSYMVTIAY LSYCLLLGGF YINRDRIPLY WIWFHYISLL
601: KYPYEAVLIN EFDDPSRCFV KGVQVFDGTL LAEVSHVMKV KLLDTLSGSL GTKITESTCL RTGPDLLMQQ GITQLSKWDC LWITLAWGLF FRILFYLSLL
701: FGSKNKRT
Arabidopsis Description
ABCG18ABC transporter G family member 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.