Factsheet for Bra005048.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005049.1-P	Field mustard	plasma membrane	39.92	100.0
Bra005051.1-P	Field mustard	plastid	82.53	100.0
CDX74853	Canola	plastid	82.39	99.35
AT2G39350.1	Thale cress	cytosol	89.92	90.41
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	72.04	73.83
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	70.7	72.65
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	72.31	71.73
Solyc05g054890.2.1	Tomato	cytosol	71.51	70.93
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.97	70.68
PGSC0003DMT400029838	Potato	extracellular	65.99	70.65
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	68.28	70.17
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.61	70.06
Solyc04g010210.1.1	Tomato	extracellular	66.13	68.91
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	61.83	65.16
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.78	64.96
GSMUA_Achr5P28450_001	Banana	plasma membrane	59.14	63.04
Os05t0120200-01	Rice	plasma membrane	58.74	62.52
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.14	62.15
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	56.45	61.67
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.33	61.39
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.18	61.38
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.87	61.34
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.05	61.23
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.05	61.23
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.53	61.23
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	64.92	61.14
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	58.47	61.1
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	56.99	61.1
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	61.16	61.07
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	60.89	60.97
Zm00001d035553_P001	Maize	plasma membrane	58.47	60.92
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	56.59	60.84
Os05t0120000-00	Rice	plasma membrane	55.51	60.74
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	56.99	60.57
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	64.78	60.55
TraesCS3B01G387500.1	Wheat	plastid	61.42	60.37
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	61.42	60.37
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	61.42	60.37
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	64.25	60.35
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	61.29	60.32
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	61.29	60.32
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	64.38	60.18
Os01t0836600-01	Rice	plasma membrane	60.48	60.08
Zm00001d042953_P001	Maize	plasma membrane	61.29	59.92
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	53.76	59.88
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.39	59.72
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.85	59.58
EES17614	Sorghum	cytosol, peroxisome, vacuole	56.72	59.44
Os03t0281900-01	Rice	cytosol, plasma membrane	61.96	58.58
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	52.82	58.22
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	52.15	57.48
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	64.25	56.84
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	56.85	53.61
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	60.35	49.94
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.31	49.79
Bra014776.1-P	Field mustard	cytosol	80.38	46.57
Bra014774.1-P	Field mustard	plasma membrane	39.52	46.45
HORVU4Hr1G058070.2	Barley	cytosol	50.0	45.64
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	40.19	45.58
HORVU5Hr1G021110.1	Barley	cytosol	23.79	41.26
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.63	36.22
Bra002234.1-P	Field mustard	cytosol	22.58	35.0
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.17	34.34
Os03t0282100-00	Rice	cytosol, nucleus, plastid	35.22	34.2
Bra013916.1-P	Field mustard	plastid	25.67	33.33
Bra022614.1-P	Field mustard	plastid	26.34	33.28
GSMUA_Achr6P08820_001	Banana	plasma membrane	54.7	32.93
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.54	29.23
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.94	29.2
Bra007999.1-P	Field mustard	plasma membrane	25.27	28.53
Bra019051.1-P	Field mustard	plasma membrane	23.79	27.79
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	23.92	27.77
Bra025152.1-P	Field mustard	plastid	18.28	27.47
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.46	27.25
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.98	26.8
Bra009203.1-P	Field mustard	plasma membrane	25.54	25.17
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.98	25.11
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.87	24.6
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.52	24.07
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.58	22.8
Bra033441.1-P	Field mustard	plastid	25.0	16.43

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra005048	EnsemblPlants:Bra005048.1	EnsemblPlants:Bra005048.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4CLG1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI00025474D6	SEG:seg	:	:	:

Description

AT2G39350 (E=0.0) | ABC transporter family protein

Coordinates

chrA05:+:3166613..3168847

Molecular Weight (calculated)

82443.0 Da

IEP (calculated)

9.356

GRAVY (calculated)

0.105

Length

744 amino acids

Sequence
(BLAST)

001: MARIVAADDD DGTPQFYSME LNSISSVSDS TLGQLLKNVS DVRKLAIGDE TPVHESFNQD NDDDNLMQTV PFVLSFDNLT YNVSIRQKLT FRDLIPRRKT
101: EDPELAQTVT PPNTKTLLNN ISGETRDGEI MAVLGASGSG KSTLIDALAN RIAKGSLKGT VKLNGETLQS RTLKVISAYV MQDDLLFPML TVEETLMFAA
201: EFRLPRSLPK SKKKLRVQAL IEQLGIKNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP ILLFLDEPTS GLDSTSAYMV VKVLKRIAQS GSIVIMSIHQ
301: PSHRVLGLLN RLIFLSRGNT VFSGSPGSLP RFFAEFGSPI PENENRTEFA LDLIRELEGS AGGTRGLIEF NKKWQEMKKE NNRQPPLTPP ASPYPNLTLK
401: EAIAASISRG KLVSGGESAT ATAATTLTVP AFANSIWIEI VTLSKRSMLN SRRQPELFGI RLASVVITGF ILATVFWRID NSPKGVQERL GFFAFAMSTM
501: FYTCAEALPV FLQERYIFMR ETAYNAYRRS SYVLSHAIVA FPSLIFLSVA FAATTFWAVG LDGGPMGFLF YCLIILASFW SGSSFVTFLS GIVPHVMLGY
601: TIVVAILAYF LLFSGFFINR NRIPDYWIWF HYMSLVKYPY EAVLQNEFSD ATKCFVRGVQ IFDNTPLGVL PEGMKLRLLD SVSRSLGTTI SSSTCLTTGA
701: DILTQQGVTQ LSKWNCLLIT VGFGFFFRAL FYFCLLLGSK NKRR

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.