Factsheet for Bra039378.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43362	Canola	cytosol, peroxisome, plasma membrane	100.0	100.0
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	93.54	92.99
VIT_19s0015g00960.t01	Wine grape	peroxisome	77.39	76.82
Solyc07g065780.1.1	Tomato	mitochondrion	46.99	71.91
KRH14200	Soybean	cytosol	71.95	71.43
KRG98450	Soybean	cytosol, peroxisome, plasma membrane	71.51	71.41
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	71.37	70.85
KRH46415	Soybean	plasma membrane	48.9	68.1
OQU76682	Sorghum	mitochondrion, plasma membrane	57.27	65.55
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	61.97	63.65
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	61.82	63.31
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	61.53	63.2
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	61.38	63.05
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	61.97	62.43
Os06t0607700-01	Rice	plasma membrane	61.97	61.34
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	61.97	61.07
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	62.11	61.04
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	53.01	49.32
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	39.5	41.97
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.59	40.13
Bra019051.1-P	Field mustard	plasma membrane	37.3	39.87
Bra009203.1-P	Field mustard	plasma membrane	43.17	38.94
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.88	38.83
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.03	38.77
GSMUA_Achr1P19280_001	Banana	plasma membrane	59.03	37.82
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.98	37.69
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.42	37.52
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.65	37.14
Bra007999.1-P	Field mustard	plasma membrane	35.83	37.03
Bra025152.1-P	Field mustard	plastid	26.43	36.36
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.7	27.69
Bra013916.1-P	Field mustard	plastid	21.73	25.83
Bra022614.1-P	Field mustard	plastid	22.32	25.81
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.17	25.68
Bra033441.1-P	Field mustard	plastid	41.7	25.09
Bra005051.1-P	Field mustard	plastid	22.32	24.76
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.4	24.37
Bra002234.1-P	Field mustard	cytosol	17.03	24.17
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	25.55	23.97
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.4	23.32
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.38	23.22
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.94	23.06
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	25.11	22.98
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.49	22.89
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.64	22.74
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.52	22.66
Bra014774.1-P	Field mustard	plasma membrane	19.68	21.17
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.43	19.03
Bra005049.1-P	Field mustard	plasma membrane	7.93	18.18
Bra014776.1-P	Field mustard	cytosol	25.84	13.71

Protein Annotations

MapMan:21.8.2.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
EnsemblPlantsGene:Bra039378	EnsemblPlants:Bra039378.1	EnsemblPlants:Bra039378.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007275
GO:GO:0008150	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987	GO:GO:0010152	GO:GO:0010584
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
UniProt:M4FE57	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF155	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000253E937	SEG:seg

Description

AT3G13220 (E=0.0) | ABC transporter family protein

Coordinates

chrScaffold000164:-:191507..194585

Molecular Weight (calculated)

77460.7 Da

IEP (calculated)

8.587

GRAVY (calculated)

0.008

Length

681 amino acids

Sequence
(BLAST)

001: MEIKRSTEEL EDNHVMQISG SNGIVHNMEF MSQAYLRNQY SSEIDIHEEF VSSYPHEDAP LPIFLKFEDV EYKVRNIQAS LKTMVSKVVT HTNSDPDGYK
101: HILKGITGST GPGEILALMG PSGSGKTTLL KIMGGRLTDN VKGKLTYNDI PYSPSVKRRI GFVTQDDVLL PQLTVEETLA FAAFLRLPSN MSKEQKYAKV
201: EMIIKELGLE RCRHTRVGGG FVKGISGGER KRTSIAYEIL VDPSLLLLDE PTSGLDSTSA TKLLHILQGV AKAGRTVITT IHQPSSRMFH MFDKLLLISE
301: GHPAYYGKAR EAMEYFSSLR ILPEIAMNPA EFLLDLATGQ VSDISLPEEL LATKTTQPDS ENVIVKYLQL RYKTDLEPKE KEENHRNRKA PEHLQIAIQV
401: KKDWTLSWWD QFMIIFRRTF RERRRDYFDM LRLVQSLGVA VVLGLLWWKS KTDTEAHLRD QVGLMFYICI FWTSSSLFGA VYVFPFEKIY LVKERKADMY
501: RLSVYYVCST LCDMVAHVLY PTFFMIIVYF MAGFSRTVPC FVFTVLTILL IAITSQGAGE FLGASVLSIK RAGMIASLVL MMFLLTGGYY VQHIPKFMQW
601: LKYLSFMHYG FRLLLKVQYS ADQVFDCASK GGCRTLQSSS SFDTVNLNGG LEELWVLLAM AFGYRLCTYV CLRKKISICH L

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.