CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46415	Soybean	plasma membrane	67.3	93.86
KRH14200	Soybean	cytosol	81.38	80.9
KRH73932	Soybean	cytosol, peroxisome, plasma membrane	80.5	80.03
Solyc07g065780.1.1	Tomato	mitochondrion	49.27	75.51
VIT_19s0015g00960.t01	Wine grape	peroxisome	74.78	74.34
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.41	71.51
CDY24203	Canola	peroxisome	71.41	71.51
CDY43362	Canola	cytosol, peroxisome, plasma membrane	71.41	71.51
AT3G13220.1	Thale cress	cytosol, peroxisome, plasma membrane	70.67	70.36
OQU76682	Sorghum	mitochondrion, plasma membrane	56.01	64.2
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	61.88	63.46
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	61.29	63.05
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	61.14	62.9
TraesCS7D01G375300.1	Wheat	cytosol, peroxisome, plasma membrane	60.56	62.29
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	61.73	62.28
TraesCS7A01G378500.2	Wheat	cytosol, peroxisome, plasma membrane	60.7	59.91
Os06t0607700-01	Rice	plasma membrane	60.41	59.88
TraesCS7B01G280300.2	Wheat	cytosol, peroxisome, plasma membrane	60.7	59.74
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	51.76	48.22
KRH55354	Soybean	cytosol, peroxisome, plasma membrane	39.15	42.79
KRH22136	Soybean	cytosol, peroxisome, plasma membrane	39.15	42.58
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	40.32	42.24
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	40.32	41.92
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	40.47	41.82
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	40.32	41.73
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.84	40.62
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.84	40.51
KRH68048	Soybean	plastid	43.84	40.41
KRG91794	Soybean	cytosol, peroxisome, plasma membrane, plastid	39.3	40.0
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.55	39.97
KRH34992	Soybean	cytosol, plasma membrane, plastid	39.15	39.91
KRG92003	Soybean	cytosol	39.59	39.59
KRH20507	Soybean	cytosol	36.22	39.27
KRH34780	Soybean	cytosol, peroxisome, plasma membrane	39.15	39.04
KRH75541	Soybean	cytosol, peroxisome, plasma membrane, plastid	38.42	38.64
KRH37571	Soybean	cytosol, peroxisome, plasma membrane, plastid	34.16	37.4
KRH71117	Soybean	cytosol, peroxisome, plasma membrane, plastid	37.39	37.28
GSMUA_Achr1P19280_001	Banana	plasma membrane	56.6	36.31
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	24.34	27.17
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	24.63	27.1
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	24.05	26.89
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	25.37	26.45
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	24.78	26.04
KRH64027	Soybean	extracellular	23.9	25.47
KRG89682	Soybean	cytosol, nucleus, peroxisome	24.19	25.15
KRH50602	Soybean	plastid	23.61	24.58
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	26.83	24.4
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	23.75	24.14
KRG91599	Soybean	cytosol, plastid	20.09	23.99
KRH67592	Soybean	plastid	25.81	23.98
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	25.81	23.91
KRH39507	Soybean	cytosol	25.22	23.56
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	15.4	22.34
KRH35792	Soybean	plasma membrane	23.02	21.66
KRG90976	Soybean	plasma membrane	22.58	21.54
KRH41868	Soybean	cytosol	24.63	21.16
KRH60557	Soybean	cytosol	24.78	21.15

Protein Annotations

EntrezGene:100806094	MapMan:21.8.2.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	EMBL:ACUP02010889	EnsemblPlantsGene:GLYMA_18G074800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	UniProt:I1N085	InterPro:IPR003439	EnsemblPlants:KRG98450	ProteinID:KRG98450
ProteinID:KRG98450.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF155	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000233ECD3	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:7088533..7092750

Molecular Weight (calculated)

77348.9 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.017

Length

682 amino acids

Sequence
(BLAST)

001: MEIGKEDEIM DMSMSPPLVG STNNDTCHNK DIMSQAYLQN KYSEIDIKIE GSNMEQNRPL PIFLKFENVE YKVRNRKAGS SNLVKTMVSK VSTQLTVEED
101: RYKKILKGIT GSIGPGEILA LMGPSGSGKT TLLRVIGGRI VDNVKGKVTY NDVRFTTAVK RRIGFVTQED VLYPQLTVEE TLVFSALLRL PTNMSKQQKY
201: AKVNTTIKEL GLERCRHTKI VGGYLKGISG GERKRTCIGY EILVDPSLLL LDEPTSGLDS TAANKLLLTL QGLAKAGRTI ITTIHQPSSR IFHMFDKLLL
301: ISEGYPVYYG KAKDTMEYFS SLRFTPQIPM NPAEFLLDLA TGQVNDISVP TDILQDQESS DPSKVVIEYL QLKYKTLLEP KEKEENHRGA NTPKHLQQAI
401: QVKKEWTLSW LDQFDILSRR TFKIRCKDYF DKLRLVQALG IALLLGLLWW KSSTNTEAQL RDQVGLAFYI CIFWTSSSIF GAVYVFPFEK YYLIKERKAD
501: MYRLSVYYAC STICDMVAHV LYPTFFMVIL YFMAGFKRTV ACFFLTLFSI LLIAITSQGA GELFGAAIMS VQRAGTAASL ILMLFLLTGG YYVQHIPKFM
601: KWLKYLSFMY YGFRLLLKVQ YSGDQLYDCE SKGGCRTLQS SPTFGIVNLK GGLKEVWILL AMALVFRLLA YLCLRRRIDH SN

Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)

001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL

Arabidopsis Description

ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.