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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43362 Canola cytosol, peroxisome, plasma membrane 99.27 99.27
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 93.25 92.7
VIT_19s0015g00960.t01 Wine grape peroxisome 77.39 76.82
Solyc07g065780.1.1 Tomato mitochondrion 46.84 71.69
KRH14200 Soybean cytosol 72.1 71.57
KRG98450 Soybean cytosol, peroxisome, plasma membrane 71.51 71.41
KRH73932 Soybean cytosol, peroxisome, plasma membrane 71.66 71.14
KRH46415 Soybean plasma membrane 48.75 67.89
OQU76682 Sorghum mitochondrion, plasma membrane 57.27 65.55
TraesCS7D01G375300.1 Wheat cytosol, peroxisome, plasma membrane 61.82 63.5
KXG20331 Sorghum cytosol, peroxisome, plasma membrane 61.97 63.46
OQU76684 Sorghum nucleus, peroxisome, plasma membrane 61.67 63.35
OQU76683 Sorghum nucleus, peroxisome, plasma membrane 61.53 63.2
Zm00001d046537_P002 Maize nucleus, peroxisome, plasma membrane 62.11 62.57
Os06t0607700-01 Rice plasma membrane 61.67 61.05
TraesCS7A01G378500.2 Wheat cytosol, peroxisome, plasma membrane 61.82 60.93
TraesCS7B01G280300.2 Wheat cytosol, peroxisome, plasma membrane 61.97 60.89
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 52.86 49.18
CDY50951 Canola cytosol, peroxisome, plastid 39.5 41.97
CDY47690 Canola cytosol, peroxisome, plastid 39.5 41.97
CDY36670 Canola cytosol 22.32 41.87
CDY49155 Canola cytosol, peroxisome, plasma membrane 39.65 41.6
CDX96366 Canola cytosol 22.32 41.19
CDY04991 Canola plastid 42.73 40.53
CDX70095 Canola plastid 42.73 40.36
CDX89252 Canola cytosol, peroxisome, plasma membrane 37.44 39.97
CDY29304 Canola cytosol, peroxisome, plasma membrane 37.3 39.81
CDX92829 Canola plasma membrane 37.59 39.75
CDY29837 Canola plasma membrane 37.44 39.6
CDY23205 Canola plastid 42.58 39.46
CDX95330 Canola plastid 42.73 39.43
CDY14079 Canola plasma membrane 43.17 39.1
CDX98933 Canola plasma membrane 43.02 38.81
CDY46506 Canola cytosol, peroxisome, plasma membrane 37.89 38.62
CDY12299 Canola cytosol, peroxisome, plasma membrane 39.65 37.92
CDY51602 Canola plastid 37.0 37.84
CDY48079 Canola plastid 36.86 37.74
GSMUA_Achr1P19280_001 Banana plasma membrane 58.88 37.72
CDX68292 Canola cytosol, peroxisome, plasma membrane 35.98 37.69
CDX99764 Canola cytosol, peroxisome, plasma membrane 37.3 37.08
CDX72849 Canola cytosol, peroxisome, plasma membrane 36.42 36.36
CDY03668 Canola plasma membrane 35.83 35.57
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 35.68 35.53
CDY12359 Canola cytosol, nucleus, plasma membrane 14.24 32.23
CDX96365 Canola plasma membrane 16.45 29.02
CDY36671 Canola plasma membrane 14.54 28.61
CDX93119 Canola cytosol, peroxisome, plasma membrane 25.26 28.43
CDX89610 Canola cytosol, peroxisome, plasma membrane 25.11 28.26
CDX76121 Canola cytosol 18.94 27.39
CDY50899 Canola cytosol 12.92 26.43
CDY27043 Canola plastid 22.47 25.98
CDY02516 Canola cytosol, peroxisome, plasma membrane 22.32 25.85
CDY59400 Canola cytosol, plasma membrane, plastid 22.32 25.85
CDX89396 Canola plasma membrane 21.73 25.83
CDX94418 Canola plastid 21.73 25.83
CDX96159 Canola plastid 22.32 25.81
CDX92533 Canola plastid 23.64 25.6
CDX76119 Canola cytosol, peroxisome, plasma membrane 24.67 25.19
CDX74853 Canola plastid 22.47 24.8
CDY02907 Canola cytosol, peroxisome, plasma membrane 23.05 24.72
CDY13996 Canola plasma membrane 17.03 24.22
CDX69629 Canola plastid 25.7 24.04
CDX73549 Canola cytosol, peroxisome, plasma membrane 26.14 23.55
CDX67624 Canola cytosol, peroxisome, plasma membrane 24.38 23.48
CDY18451 Canola cytosol, peroxisome, plasma membrane 25.4 23.32
CDY09810 Canola plastid 25.7 23.27
CDY37656 Canola cytosol, peroxisome, plasma membrane 24.23 23.14
CDY65003 Canola cytosol, peroxisome, plasma membrane 24.23 23.11
CDX93388 Canola plasma membrane 25.11 23.08
CDY40201 Canola cytosol 23.79 22.88
CDY37372 Canola cytosol, peroxisome, plasma membrane 24.52 22.78
CDY40385 Canola cytosol, peroxisome, plasma membrane 24.52 22.66
CDX73404 Canola plasma membrane 23.79 20.53
CDY44641 Canola plasma membrane 8.08 18.52
CDX76122 Canola plasma membrane 25.84 13.73
CDY02906 Canola plasma membrane 25.84 13.7
Protein Annotations
MapMan:21.8.2.1MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078GHU6UniProt:A0A078GHU6InterPro:AAA+_ATPase
InterPro:ABC_2_transInterPro:ABC_transporter-likeEnsemblPlants:CDY24203ProteinID:CDY24203ProteinID:CDY24203.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00026303001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF155SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EE35D5SEG:seg::
Description
BnaC01g37830DBnaC01g37830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHU6]
Coordinates
chrLK032155:+:241540..244850
Molecular Weight (calculated)
77465.7 Da
IEP (calculated)
8.586
GRAVY (calculated)
0.005
Length
681 amino acids
Sequence
(BLAST)
001: MEIKRSAEEL EDNHVMQISG SNGIVHNMEF MSQAYLRNQY SSEIDIHEEF VSPYPHEDAP LPIFLKFEDV EYKVRNIQAS LKTMVSKVVT QTNSDPDGYK
101: HILKGITGST GPGEILALMG PSGSGKTTLL KIMGGRLTDN VKGKLTYNDI PYSPSVKRRI GFVTQDDVLL PQLTVEETLA FAAFLRLPSN MSKEQKYAKV
201: EMIIKELGLE RCRHTRVGGG FVKGISGGER KRTSIAYEIL VDPSLLLLDE PTSGLDSTSA TKLLHILQGV AKAGRTVITT IHQPSSRMFH MFDKLLLISE
301: GHPAYYGKAR EAMEYFSSLR ILPEIAMNPA EFLLDLATGQ VSDISLPEEL LATKTTQPDS ENVIVKYLQL RYKTDLEPKE KEENHRNRKA PEHLQIAIQV
401: KKDWTLSWWD QFMIIFRRTF RERRRDYFDM LRLVQSLGVA VVLGLLWWKS KTDTEAHLRD QVGLMFYICI FWTSSSLFGA VYVFPFEKIY LVKERKADMY
501: RLSVYYVCST LCDMVAHVLY PTFFMIIVYF MAGFSRTVPC FVFTVLTILL IAITSQGAGE FLGASVLSIK RAGMIASLVL MMFLLTGGYY VQHIPKFMQW
601: LKYLSFMHYG FRLLLKVQYS ADQVFDCASK GGCRTLQSSS SFDTVNLNGG LEELWVLLGM AFGYRLCTYF CLRKKISICH L
Best Arabidopsis Sequence Match ( AT3G13220.1 )
(BLAST)
001: MEIRRSTEEV EENHVMQITG SNGIVHNMEF MPQAYLRNQY SSEIDIDEEF VSTYPLEDAP LPIFLKFEDV EYKVRNSHAS SANLVKTMVS KVVTHTNPDP
101: DGYKHILKGI TGSTGPGEIL ALMGPSGSGK TTLLKIMGGR LTDNVKGKLT YNDIPYSPSV KRRIGFVTQD DVLLPQLTVE ETLAFAAFLR LPSSMSKEQK
201: YAKIEMIIKE LGLERCRRTR VGGGFVKGIS GGERKRASIA YEILVDPSLL LLDEPTSGLD STSATKLLHI LQGVAKAGRT VITTIHQPSS RMFHMFDKLL
301: LISEGHPAFY GKARESMEYF SSLRILPEIA MNPAEFLLDL ATGQVSDISL PDELLAAKTA QPDSEEVLLK YLKQRYKTDL EPKEKEENHR NRKAPEHLQI
401: AIQVKKDWTL SWWDQFLILS RRTFRERRRD YFDKLRLVQS LGVAVVLGLL WWKSKTDTEA HLRDQVGLMF YICIFWTSSS LFGAVYVFPF EKIYLVKERK
501: AEMYRLSVYY VCSTLCDMVA HVLYPTFFMI IVYFMAEFNR NIPCFLFTVL TILLIAITSQ GAGEFLGASV LSIKRAGMIA SLVLMLFLLT GGYYVQHIPK
601: FMQWLKYLSF MHYGFRLLLK VQYSADQLFE CGSKGGCRTL QSSSSFDTIN LNGGLQELWV LLAMAFGYRL CAYFCLRKKI SICHL
Arabidopsis Description
ABCG26ABC transporter G family member 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK50]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.