CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	100.0	100.0
CDY59400	Canola	cytosol, plasma membrane, plastid	97.96	97.96
AT1G53270.1	Thale cress	plasma membrane	92.69	92.37
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	66.16	63.46
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	64.29	61.97
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	63.78	61.37
PGSC0003DMT400032370	Potato	plasma membrane	63.61	60.32
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.27	59.9
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	39.12	55.56
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	44.39	51.48
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	52.38	50.91
TraesCS3B01G251300.1	Wheat	plastid	52.38	50.91
TraesCS3A01G221400.1	Wheat	plastid	52.38	50.91
HORVU3Hr1G054160.1	Barley	plastid	52.55	50.82
Os01t0615500-00	Rice	plastid	51.53	49.43
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	51.02	49.26
EES03276	Sorghum	mitochondrion	51.02	49.02
CDX89610	Canola	cytosol, peroxisome, plasma membrane	47.28	45.95
CDX93119	Canola	cytosol, peroxisome, plasma membrane	47.11	45.79
CDX94418	Canola	plastid	42.18	43.28
CDX89396	Canola	plasma membrane	42.01	43.11
CDY27043	Canola	plastid	41.84	41.77
CDX96159	Canola	plastid	41.84	41.77
CDY13996	Canola	plasma membrane	34.01	41.75
CDX92533	Canola	plastid	41.16	38.47
CDX76121	Canola	cytosol	26.36	32.91
CDY02907	Canola	cytosol, peroxisome, plasma membrane	35.03	32.44
CDX74853	Canola	plastid	33.67	32.09
CDY44641	Canola	plasma membrane	15.99	31.65
CDY40201	Canola	cytosol	36.56	30.37
CDX76119	Canola	cytosol, peroxisome, plasma membrane	34.35	30.28
CDX69629	Canola	plastid	36.22	29.26
CDX67624	Canola	cytosol, peroxisome, plasma membrane	34.86	29.0
CDY37656	Canola	cytosol, peroxisome, plasma membrane	34.35	28.33
CDY09810	Canola	plastid	36.22	28.32
CDY65003	Canola	cytosol, peroxisome, plasma membrane	34.35	28.29
CDY18451	Canola	cytosol, peroxisome, plasma membrane	35.2	27.9
CDX93388	Canola	plasma membrane	35.03	27.8
CDY36670	Canola	cytosol	17.01	27.55
CDX73404	Canola	plasma membrane	36.9	27.5
CDX73549	Canola	cytosol, peroxisome, plasma membrane	35.03	27.25
CDY50899	Canola	cytosol	14.97	26.43
CDX96366	Canola	cytosol	16.5	26.29
CDY49155	Canola	cytosol, peroxisome, plasma membrane	28.57	25.89
CDY50951	Canola	cytosol, peroxisome, plastid	27.89	25.59
CDY47690	Canola	cytosol, peroxisome, plastid	27.89	25.59
CDY29304	Canola	cytosol, peroxisome, plasma membrane	27.55	25.39
CDX89252	Canola	cytosol, peroxisome, plasma membrane	27.38	25.24
CDY46506	Canola	cytosol, peroxisome, plasma membrane	28.23	24.85
CDY48079	Canola	plastid	27.89	24.66
CDX92829	Canola	plasma membrane	26.87	24.53
CDY51602	Canola	plastid	27.72	24.47
CDX99764	Canola	cytosol, peroxisome, plasma membrane	28.4	24.38
CDY12359	Canola	cytosol, nucleus, plasma membrane	12.41	24.25
CDY29837	Canola	plasma membrane	26.53	24.22
CDX68292	Canola	cytosol, peroxisome, plasma membrane	26.19	23.69
CDY12299	Canola	cytosol, peroxisome, plasma membrane	28.4	23.46
CDX72849	Canola	cytosol, peroxisome, plasma membrane	26.7	23.02
CDY23205	Canola	plastid	28.74	22.99
CDX82199	Canola	cytosol, peroxisome, plasma membrane, plastid	26.36	22.66
CDX70095	Canola	plastid	27.72	22.61
CDY03668	Canola	plasma membrane	26.36	22.59
CDY04991	Canola	plastid	27.38	22.42
CDX95330	Canola	plastid	28.06	22.36
CDY24203	Canola	peroxisome	25.85	22.32
CDY43362	Canola	cytosol, peroxisome, plasma membrane	25.68	22.17
CDX98933	Canola	plasma membrane	27.89	21.72
CDY37372	Canola	cytosol, peroxisome, plasma membrane	27.04	21.69
CDY14079	Canola	plasma membrane	27.72	21.68
CDY40385	Canola	cytosol, peroxisome, plasma membrane	27.04	21.57
CDX96365	Canola	plasma membrane	12.24	18.65
CDY36671	Canola	plasma membrane	10.88	18.5
CDY02906	Canola	plasma membrane	36.56	16.73
CDX76122	Canola	plasma membrane	36.05	16.54

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	GO:A0A078EN07	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlants:CDY02516	ProteinID:CDY02516	ProteinID:CDY02516.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00114177001	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF441	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0002545804	SEG:seg	:	:

Description

BnaA08g01230D

Coordinates

chrLK031935:-:652095..653861

Molecular Weight (calculated)

66205.1 Da

IEP (calculated)

9.767

GRAVY (calculated)

0.086

Length

588 amino acids

Sequence
(BLAST)

001: MELPVKAPVS GCRKISYKLE TKNLSYRLYG NTSKFSNLCG LLNEKEEKVI LKDVSCDARS GEITAIAGPS GAGKTTLLEI LAGKVSQGKV SGQVLVNGRP
101: MNGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTN RKEAKAKVKK LMEELGLEHV ADSRIGEGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVMLLKDMTI KQGKTIVLTI HQPGFRILEQ INRIVLLSSG LVVQNGSVNS LYQKIKFFGH QIPRRVNVLE YAIDIAGSLE PVLTQSCREI
301: SCYGHGKTWK SNNAGREFHQ PDSHSNSVLE EVQILGQRSC KNIFRTKQLF TTRALQASIA GLILGSIYLN VGNQKQEGRV LRTGFFAFTL TFLLSSTTEG
401: LPIFLQDRRI LMRETSRRAY RVLSYVLADT LIFIPFLLII SMLFATPVYW LVGLRRELDG FLYFSLVIWI VLLMSNSFVA CFSALVPNFI MGTSVISGLM
501: GSFFLFSGYF IAKDRIPVYW EFMHYLSLFK YPFECLMINE YRGDVFLKEQ DLEESQKWSN LGIMASFIVG YRVLGFFILW YRCYKTKR

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.