Factsheet for Os01t0615500-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G221400.1	Wheat	plastid	81.57	82.64
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	81.57	82.64
TraesCS3B01G251300.1	Wheat	plastid	81.57	82.64
HORVU3Hr1G054160.1	Barley	plastid	81.57	82.24
EES03276	Sorghum	mitochondrion	79.28	79.41
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	65.25	78.9
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	77.65	78.16
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	41.11	60.87
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	57.59	57.59
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	53.34	55.14
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	53.67	53.93
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	53.67	53.85
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	52.85	52.17
PGSC0003DMT400032370	Potato	plasma membrane	52.53	51.94
CDY59400	Canola	cytosol, plasma membrane, plastid	49.76	51.87
AT1G53270.1	Thale cress	plasma membrane	49.92	51.86
Solyc07g053300.1.1	Tomato	cytosol	51.22	51.64
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.43	51.53
CDY02516	Canola	cytosol, peroxisome, plasma membrane	49.43	51.53
PGSC0003DMT400052674	Potato	cytosol, peroxisome, plasma membrane	50.73	51.15
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	33.93	42.8
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	41.44	37.63
Os05t0120000-00	Rice	plasma membrane	34.75	31.32
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	34.42	30.4
Os01t0836600-01	Rice	plasma membrane	35.89	29.37
Os05t0120200-01	Rice	plasma membrane	33.44	29.33
Os11t0177400-01	Rice	plasma membrane	20.39	26.43
Os03t0281900-01	Rice	cytosol, plasma membrane	32.63	25.41
Os09t0401100-01	Rice	extracellular	34.42	24.14
Os06t0607700-01	Rice	plasma membrane	25.94	23.11
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	28.06	22.72
Os01t0121700-01	Rice	plasma membrane	23.98	22.01
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	26.92	21.4
Os03t0282100-00	Rice	cytosol, nucleus, plastid	24.96	19.97

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:4326649	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:BAB17113.1	ProteinID:BAS73161.1	ProteinID:EEE54986.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EnsemblPlantsGene:Os01g0615500	EnsemblPlants:Os01t0615500-00
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF182	UniProt:Q9FTG6	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000A1921
RefSeq:XP_015634250.1	SEG:seg	:	:	:	:

Description

ABC TRANSPORTER G FAMILY MEMBER 2ABC transporter-like domain containing protein. (Os01t0615500-00)

Coordinates

chr1:-:24408462..24410310

Molecular Weight (calculated)

65291.7 Da

IEP (calculated)

10.115

GRAVY (calculated)

0.346

Length

613 amino acids

Sequence
(BLAST)

001: MSSAAVASPR ETVSPPMSLG KVGVAVVGGG RRRSRYRLET RGLSYVLPAR GAAARLFLGG GGEERLLLRG VTCEAPPGEV VAIVGPSGAG KTTLLSVLAG
101: SADPARVVAG EVLVNGRAMD AARFRRVSGH VPQDDALFPM LTVEESLVYS ARLRLRGAGG GNGGAAVARA RELMAELGLR HVAGSRVGRV SGGERRRVSI
201: GVDLVHDPAV LLLDEPTSGL DSGSALHIVK MLRDMAAAHG KTVVLTIHQP GFRILELLDR VVLLADGAVR HHGSLGFLEA RLAASGHGIP PHVNVLEYAM
301: ECIDSLKPEV TTADASHADA ASGSSRRRAS SAPYANSAAA EVCILSARFA KTVLRTPQLF AARMAQSLLA GAFLGTVFLG AGDLQSRLGF FAFTLTYVLS
401: STTEGLPVFL QERRILERET SRGAHRVASY VASNAAVFLP LLLASALLYA APVYWLAGLA REPGRFAYFS LVVWLVMLTA NSFVACFSAL APSYIVANSL
501: IAGLIGCFFL FSGYFVASKN IPRYWVFMHY ASLFKYPFEA FLVNEYGGAR GGAECLAEVG GGLCVLDGAT LLRQQGMRAS MRWSNVAVML GFVVGYRLLC
601: FVFLWFRCHR MRR

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.