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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G251300.1 Wheat plastid 98.36 98.84
TraesCS3A01G221400.1 Wheat plastid 98.03 98.51
TraesCS3D01G231500.1 Wheat mitochondrion, plastid 97.86 98.35
Os01t0615500-00 Rice plastid 82.24 81.57
Zm00001d011350_P001 Maize cytosol, peroxisome, plasma membrane 66.78 80.08
EES03276 Sorghum mitochondrion 79.44 78.92
Zm00001d044476_P001 Maize cytosol, peroxisome, plasma membrane 78.29 78.16
GSMUA_AchrUn_... Banana cytosol, mitochondrion, peroxisome, plasma membrane 41.45 60.87
VIT_19s0014g01540.t01 Wine grape cytosol, plasma membrane, plastid 56.91 56.44
VIT_12s0028g02360.t01 Wine grape cytosol, mitochondrion, plasma membrane, plastid 54.77 56.16
KRH27319 Soybean cytosol, mitochondrion, plasma membrane 54.77 54.59
KRH21994 Soybean cytosol, peroxisome, plasma membrane 54.61 54.34
CDY59400 Canola cytosol, plasma membrane, plastid 51.15 52.89
AT1G53270.1 Thale cress plasma membrane 51.32 52.88
Solyc07g062630.1.1 Tomato cytosol, peroxisome, plasma membrane 53.95 52.82
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 50.82 52.55
CDY02516 Canola cytosol, peroxisome, plasma membrane 50.82 52.55
PGSC0003DMT400032370 Potato plasma membrane 53.45 52.42
Solyc07g053300.1.1 Tomato cytosol 51.81 51.81
PGSC0003DMT400052674 Potato cytosol, peroxisome, plasma membrane 51.48 51.48
HORVU2Hr1G124860.3 Barley nucleus, peroxisome, plastid 39.14 42.96
HORVU1Hr1G056890.2 Barley cytosol 43.42 40.31
HORVU7Hr1G081250.1 Barley mitochondrion 41.61 38.33
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 36.68 33.38
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 36.18 32.31
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 38.16 29.4
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 36.18 29.06
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 36.18 29.06
HORVU4Hr1G018800.7 Barley plastid 28.95 27.41
HORVU5Hr1G060690.4 Barley mitochondrion 32.4 27.17
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 16.45 26.18
HORVU7Hr1G014870.1 Barley cytosol, peroxisome, plasma membrane 29.28 25.99
HORVU5Hr1G021110.1 Barley cytosol 15.46 21.91
HORVU4Hr1G058070.2 Barley cytosol 28.78 21.47
HORVU4Hr1G072620.1 Barley plastid 26.48 21.27
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 21.71 20.12
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 22.53 18.72
HORVU3Hr1G005830.3 Barley cytosol 11.51 18.52
HORVU3Hr1G066220.1 Barley plastid 23.85 18.19
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300UniProt:A0A287L3B8InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:HORVU3Hr1G054160
EnsemblPlants:HORVU3Hr1G054160.1InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF182SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelix
UniParc:UPI000B477705SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:+:400102022..400104474
Molecular Weight (calculated)
65665.3 Da
IEP (calculated)
9.738
GRAVY (calculated)
0.334
Length
608 amino acids
Sequence
(BLAST)
001: MASPRETVVT PAMSLSKTGT GRRRPRYRLE TRALSYVLPA RGVRVSSFLP GGKGGGGERL LLRSVTCEAA PGEVVAIVGP SGAGKTTLLS VLAGSADPAR
101: VLTGAVLVNG CPMDAARFRR VSGHVPQDDA LFPMLTVEES LLYSARLRLR AAPGAAEARA RELMAELGLR HVANSRVASV SGGERRRVSI GVDLVHDPAV
201: LLLDEPTSGL DSGSALHIVK MLRDMATAHG KTVVLTIHQP GFRILELLDR VVLLADGAVR HHGSLPFLEA RLAASGHSIP AHVNVLEYAM ETIDTLKPDV
301: VLATALTYQD VAGPVPSPSS SSARRAAYAN SAAEEVCILS GRFVKTVLRT PQLFAARMVQ SAVVGVFLGT IFLGTTDLQS RLGFFAFNLT FVLSSTTEGL
401: PVFLQERRIL ERETTRGAYR VSSYVASNAA VFLPFLLAAA LLYATPVYWL VGLAREPASF AYFALVIWLV MLTANSFTAC LSALAPNYIV GNSLIAGFIG
501: CFFLFSGYFV ASKDIPQYWV FMHYISLFKY PFEALIVNEY GGARGGQECL ASAPGGGMCV LDGTMLLRQQ GMRESMRWSN LGVMLGFVVG YRVLCFVFLW
601: YRCHRMRR
Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)
001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS
Arabidopsis Description
ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.