Factsheet for Solyc07g053300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052674	Potato	cytosol, peroxisome, plasma membrane	97.37	97.37
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	62.01	63.58
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.21	57.97
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	37.17	54.59
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	43.91	52.66
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	52.47	52.38
TraesCS3B01G251300.1	Wheat	plastid	51.81	52.07
TraesCS3A01G221400.1	Wheat	plastid	51.81	52.07
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	51.81	52.07
HORVU3Hr1G054160.1	Barley	plastid	51.81	51.81
EES03276	Sorghum	mitochondrion	51.81	51.47
Os01t0615500-00	Rice	plastid	51.64	51.22
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	45.72	45.28
Solyc03g007690.1.1	Tomato	plastid	41.45	42.21
Solyc03g113690.1.1	Tomato	plastid	44.08	40.73
Solyc04g010210.1.1	Tomato	extracellular	34.05	28.99
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	33.39	28.27
Solyc05g054890.2.1	Tomato	cytosol	34.21	27.73
Solyc09g005970.1.1	Tomato	plasma membrane	33.39	27.51
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	28.29	27.39
Solyc11g018690.1.1	Tomato	cytosol	15.3	27.19
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.97	26.75
Solyc09g098410.1.1	Tomato	nucleus	31.74	26.47
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	27.14	26.19
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.64	25.08
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.64	24.73
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	27.14	24.44
Solyc01g097430.2.1	Tomato	cytosol, nucleus	32.24	23.39
Solyc01g006720.2.1	Tomato	plastid	27.3	22.93
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.97	22.71
Solyc05g008350.2.1	Tomato	nucleus, plastid	25.82	22.11
Solyc07g065780.1.1	Tomato	mitochondrion	15.3	20.9
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	9.87	20.69

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4CFM7	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF441	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc07g053300.1	EnsemblPlants:Solyc07g053300.1.1
TMHMM:TMhelix	UniParc:UPI000276BE21	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:61771064..61772890

Molecular Weight (calculated)

68417.5 Da

IEP (calculated)

8.341

GRAVY (calculated)

0.172

Length

608 amino acids

Sequence
(BLAST)

001: MEILPVKTSD DRYKIEARNL SYKLPAKYNE FKWIGKKLAN NNKASSTYIL RNVSCEAKPG EIAAVVGPSG AGKTTLLDIL AGNVGPSCVS GHVLVNDQPM
101: KPANFRRISG YVTQDEALFP LLTVEETLMY SARFRLRAGD DKAKDRVKTL LNELGLDHVA GLKVGSESSR TISGGEKRRV AIGVELVHDP AVVLLDEPTS
201: GLDSASAFHV MHMLKSMAKN HGKTIVLTIH QPGFRILELF DKAVLLSSGL VLHNGSLHLL EEKLKSTGHF IPHHVNVLEF AIDITDSLAE CLHSGDQSDI
301: EKCDTEQESD NMLNKNTNKE VLYSNSPLKE VLILSQRFCR NIFRTKQLFL AKVIQALLVG LILGSIFFNA YNNNNKNLEL QSQVGFFAFS LTFLLSSNTE
401: ALPIFLEERR ILMRETSRGA YRISTYNIAN TIVFLPFLFI VALLYAIPVY WLVGLKYEFS AFAYYTLVSW MIFAMGNSFV AACSALVPNF LLGMSFIGCL
501: IGAFFLFSGY FISKESIPMF WLFVHYLSLF KYPFECFLIN EYGGESGKLK CIQKVDGVCL MYGEQLLTRY GLEESQKWSN IAIMLSFIFC YRFLCFLILW
601: YRSIRNKC

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.