Factsheet for Solyc05g008350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078356	Potato	extracellular, plasma membrane, vacuole	94.93	93.22
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	77.18	75.17
GSMUA_Achr10P...	Banana	plasma membrane	69.15	73.28
KRH35792	Soybean	plasma membrane	73.94	72.41
Os01t0121700-01	Rice	plasma membrane	67.75	72.01
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	67.32	71.99
HORVU3Hr1G005830.3	Barley	cytosol	38.31	71.96
TraesCS3B01G017100.1	Wheat	extracellular, plasma membrane, vacuole	67.04	71.69
TraesCS3D01G019000.1	Wheat	golgi	67.18	71.62
KRG90976	Soybean	plasma membrane	72.11	71.61
TraesCS3A01G026500.1	Wheat	extracellular, plasma membrane, vacuole	67.04	71.47
AT2G01320.3	Thale cress	peroxisome, plastid, vacuole	73.1	71.29
CDY37372	Canola	cytosol, peroxisome, plasma membrane	73.38	71.08
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.38	70.69
CDY40385	Canola	cytosol, peroxisome, plasma membrane	73.38	70.69
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	67.89	69.35
HORVU3Hr1G005770.1	Barley	endoplasmic reticulum	31.97	59.42
Solyc11g018690.1.1	Tomato	cytosol	14.37	29.82
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.92	28.09
Solyc08g075430.2.1	Tomato	cytosol, peroxisome, plasma membrane	25.49	28.02
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.37	27.46
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	25.77	27.11
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.24	26.92
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.1	26.71
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.38	26.43
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	22.82	26.09
Solyc07g053300.1.1	Tomato	cytosol	22.11	25.82
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	10.28	25.17
Solyc01g006720.2.1	Tomato	plastid	25.49	25.0
Solyc04g010210.1.1	Tomato	extracellular	24.37	24.23
Solyc03g007690.1.1	Tomato	plastid	19.86	23.62
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.66	23.4
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	23.66	23.27
Solyc07g065780.1.1	Tomato	mitochondrion	14.23	22.7
Solyc05g054890.2.1	Tomato	cytosol	23.52	22.27
Solyc03g113690.1.1	Tomato	plastid	20.56	22.19
Solyc09g005970.1.1	Tomato	plasma membrane	22.82	21.95
Solyc09g098410.1.1	Tomato	nucleus	21.83	21.26
Solyc01g097430.2.1	Tomato	cytosol, nucleus	24.08	20.41

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
UniProt:K4BX09	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF262	SMART:SM00382	SUPFAM:SSF52540	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g008350.2
EnsemblPlants:Solyc05g008350.2.1	TMHMM:TMhelix	UniParc:UPI000276629B	SEG:seg	:	:

Description

ABC transporter G family member 7 [Source:Projected from Arabidopsis thaliana (AT2G01320) UniProtKB/Swiss-Prot;Acc:Q9ZU35]

Coordinates

chr5:+:2707862..2717543

Molecular Weight (calculated)

77995.0 Da

IEP (calculated)

7.094

GRAVY (calculated)

-0.058

Length

710 amino acids

Sequence
(BLAST)

001: MLPIGGKGGG IGQLLAAVAA ALLLRLFSSP GPAIVPENED AFDDDGERGS ENEEATITGK VLPVTIRWSN ITCSLSDKST NTVRFLLKNV TGEAKPGRLL
101: AIMGPSGSGK TTLLNVLAGQ TKASPKLNLS GLLDINGVPF SNKIYKFAYV RQEDLFFSQL TVRETLSLAA ELQLQDVSSI EERDEYVNNL LFKTGLVSCA
201: DSQIGDAKVR GISGGEKKRL SLACELIASP SVVFADEPTT GLDAFQAERV METLRQLAQD GHTVICSIHQ PRGSVYAKFD DIVLLAGGSL IYAGPARDEV
301: LAYFSKFGYI CPDHVNPAEF LADLISIDYS SRESVYSSQK RINGLVESFS EKIPEVLYAT SLVRDSSKTH VNFQKKSISR KGGWWRQFRL LLKRAWMQAS
401: RDGPTNKVRA RMSIASALIF GSVFWRMGRS QTSIQDRMGL LQVAAINTAM AALTKTVGVF PKERAIVDRE RAKGSYALGP YLLSKLIAEI PVGAAFPLLF
501: GGILYPMARL HPTISRFGKF CAIVTVESFA ASAMGLTVGA MVPTTEAALA LGPSLMTVFI VFGGYYVNSD NTPIIFQWIP RVSLIRWAFQ GLSINEFSGL
601: QFEHQKTSDI QSGEQVLERL SFGSSRIGDT IIAQSRILMF WYYTTYLLLE KNKPKYQRLE PPLRLKDIEE EPEEEAKLQP VKDDDLPEPT QQVESPPSDE
701: GAYQKEMLVQ

Best Arabidopsis Sequence Match ( AT2G01320.3 )
(BLAST)

001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEAGSKV

Arabidopsis Description

ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.