Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g008350.2.1 | Tomato | nucleus, plastid | 93.22 | 94.93 |
| VIT_01s0011g04670.t01 | Wine grape | mitochondrion, plasma membrane | 76.49 | 75.86 |
| KRH35792 | Soybean | plasma membrane | 73.31 | 73.1 |
| GSMUA_Achr10P... | Banana | plasma membrane | 67.63 | 72.99 |
| KRG90976 | Soybean | plasma membrane | 71.65 | 72.45 |
| HORVU3Hr1G005830.3 | Barley | cytosol | 37.76 | 72.22 |
| AT2G01320.3 | Thale cress | peroxisome, plastid, vacuole | 72.61 | 72.12 |
| Os01t0121700-01 | Rice | plasma membrane | 66.53 | 72.01 |
| TraesCS3B01G017100.1 | Wheat | extracellular, plasma membrane, vacuole | 66.11 | 71.99 |
| TraesCS3D01G019000.1 | Wheat | golgi | 66.25 | 71.92 |
| CDY37372 | Canola | cytosol, peroxisome, plasma membrane | 72.89 | 71.9 |
| EES00402 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 65.98 | 71.84 |
| CDY40385 | Canola | cytosol, peroxisome, plasma membrane | 73.17 | 71.78 |
| TraesCS3A01G026500.1 | Wheat | extracellular, plasma membrane, vacuole | 66.11 | 71.77 |
| Bra014326.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 72.89 | 71.51 |
| Zm00001d008512_P002 | Maize | golgi, plasma membrane, vacuole | 66.53 | 69.21 |
| HORVU3Hr1G005770.1 | Barley | endoplasmic reticulum | 31.54 | 59.69 |
| PGSC0003DMT400002293 | Potato | cytosol, peroxisome, plasma membrane | 23.93 | 28.69 |
| PGSC0003DMT400039671 | Potato | plasma membrane | 21.44 | 27.88 |
| PGSC0003DMT400004973 | Potato | cytosol, peroxisome, plasma membrane | 24.9 | 27.86 |
| PGSC0003DMT400047547 | Potato | cytosol, peroxisome, plasma membrane | 25.45 | 27.79 |
| PGSC0003DMT400039676 | Potato | plasma membrane | 23.51 | 27.03 |
| PGSC0003DMT400049667 | Potato | cytosol, peroxisome, plasma membrane | 22.68 | 26.75 |
| PGSC0003DMT400032370 | Potato | plasma membrane | 22.68 | 26.45 |
| PGSC0003DMT400019318 | Potato | cytosol, nucleus, peroxisome | 24.62 | 26.37 |
| PGSC0003DMT400052674 | Potato | cytosol, peroxisome, plasma membrane | 21.99 | 26.15 |
| PGSC0003DMT400059944 | Potato | cytosol, peroxisome, plasma membrane | 23.1 | 26.05 |
| PGSC0003DMT400054994 | Potato | plastid | 25.03 | 24.93 |
| PGSC0003DMT400029838 | Potato | extracellular | 23.1 | 24.03 |
| PGSC0003DMT400053843 | Potato | cytosol, plasma membrane, plastid | 19.5 | 23.66 |
| PGSC0003DMT400029881 | Potato | cytosol, peroxisome, plasma membrane | 23.37 | 23.34 |
| PGSC0003DMT400060438 | Potato | cytosol, peroxisome, plasma membrane, plastid | 23.24 | 23.2 |
| PGSC0003DMT400002062 | Potato | cytosol | 23.93 | 22.76 |
| PGSC0003DMT400062852 | Potato | plastid | 20.19 | 22.09 |
| PGSC0003DMT400061466 | Potato | plasma membrane | 22.55 | 22.0 |
| PGSC0003DMT400084876 | Potato | cytosol | 21.02 | 20.85 |
| PGSC0003DMT400050007 | Potato | cytosol | 23.93 | 20.79 |
Protein Annotations
| EntrezGene:102603356 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC_2_trans | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| UniProt:M1CZY3 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF01061 | EnsemblPlantsGene:PGSC0003DMG400030507 | PGSC:PGSC0003DMG400030507 |
| EnsemblPlants:PGSC0003DMT400078356 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19241 | PANTHER:PTHR19241:SF262 | SMART:SM00382 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002955E30 | RefSeq:XP_006344214.1 | SEG:seg |
Description
Abc transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400030507]
Coordinates
chr5:-:3945081..3955925
Molecular Weight (calculated)
79364.4 Da
IEP (calculated)
6.086
GRAVY (calculated)
-0.091
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPITGKGSG VGQLLAAVAA ALLLRLFSSP GPAILPDNED VPDDDGERGS ENDEATVTGK VLPVTIRWTN ITCSLSDKSA NTVRFLLKNV TGEAKPGRLL
101: AIMGPSGSGK TTLLNVLAGQ TKASPKLNLS GLLDINGVPF SNKIYKFAYV RQEDLFFSQL TVRETLSLAA ELQLQDISSI EERDEYVNNL LFKIGLVSCA
201: DSRIGDAKVR GISGGEKKRL SLACELIASP SVVFADEPTT GLDAFQAERV METLRQLAQD GHTVICSIHQ PRGSVYAKFD DIVLLAGGSL IYAGPARDEV
301: LAYFSKFGYI CPDHVNPAEF LADLISIDYS SRESVYSSQK RINGLVESFS EKIPEVLYAT SLVRDSSKTH VNFQKKSISR KGGWWRQFRL LLKRAWMQAS
401: RDGPTNKVRA RMSIASALIF GSIFWRMGRS QTSIQDRMGL LQVAAINTAM AALTKTVGVF PKERAIVDRE RAKGFYALGP YLLSKLIAEI PVGAAFPLLF
501: GGILYPMARL HPTISRFGKF CGIVTVESFA ASAMGLTVGA MVPTTEAALA LGPSLMTVFI VFGGSYVNSD NTPIIFRWIP RVSLIRWAFQ GLSINEFSGL
601: QFEHQNTFDV QSGEQVLERQ SFGGSRIGDT ITAQSRILMF WYYTTYLLLE KNKPKYQRLE PPPRLKDIEE EPEEEAKLQP IKDDDLPEPT QQVESPPSDE
701: GKPDEQQESS PADPLDLFTL DGL
101: AIMGPSGSGK TTLLNVLAGQ TKASPKLNLS GLLDINGVPF SNKIYKFAYV RQEDLFFSQL TVRETLSLAA ELQLQDISSI EERDEYVNNL LFKIGLVSCA
201: DSRIGDAKVR GISGGEKKRL SLACELIASP SVVFADEPTT GLDAFQAERV METLRQLAQD GHTVICSIHQ PRGSVYAKFD DIVLLAGGSL IYAGPARDEV
301: LAYFSKFGYI CPDHVNPAEF LADLISIDYS SRESVYSSQK RINGLVESFS EKIPEVLYAT SLVRDSSKTH VNFQKKSISR KGGWWRQFRL LLKRAWMQAS
401: RDGPTNKVRA RMSIASALIF GSIFWRMGRS QTSIQDRMGL LQVAAINTAM AALTKTVGVF PKERAIVDRE RAKGFYALGP YLLSKLIAEI PVGAAFPLLF
501: GGILYPMARL HPTISRFGKF CGIVTVESFA ASAMGLTVGA MVPTTEAALA LGPSLMTVFI VFGGSYVNSD NTPIIFRWIP RVSLIRWAFQ GLSINEFSGL
601: QFEHQNTFDV QSGEQVLERQ SFGGSRIGDT ITAQSRILMF WYYTTYLLLE KNKPKYQRLE PPPRLKDIEE EPEEEAKLQP IKDDDLPEPT QQVESPPSDE
701: GKPDEQQESS PADPLDLFTL DGL
001: MAPFGGKSLA DVVSGIGGNG VGGALAAVAA ALLVRLFAGP GIALLPEDEA EDDYAETEDG GGDSIRPVTI RWRNITCSLS DKSSKSVRFL LKNVSGEAKP
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGL
101: GRLLAIMGPS GSGKTTLLNV LAGQLSLSPR LHLSGLLEVN GKPSSSKAYK LAFVRQEDLF FSQLTVRETL SFAAELQLPE ISSAEERDEY VNNLLLKLGL
201: VSCADSCVGD AKVRGISGGE KKRLSLACEL IASPSVIFAD EPTTGLDAFQ AEKVMETLQK LAQDGHTVIC SIHQPRGSVY AKFDDIVLLT EGTLVYAGPA
301: GKEPLTYFGN FGFLCPEHVN PAEFLADLIS VDYSSSETVY SSQKRVHALV DAFSQRSSSV LYATPLSMKE ETKNGMRPRR KAIVERTDGW WRQFFLLLKR
401: AWMQASRDGP TNKVRARMSV ASAVIFGSVF WRMGKSQTSI QDRMGLLQVA AINTAMAALT KTVGVFPKER AIVDRERSKG SYSLGPYLLS KTIAEIPIGA
501: AFPLMFGAVL YPMARLNPTL SRFGKFCGIV TVESFAASAM GLTVGAMVPS TEAAMAVGPS LMTVFIVFGG YYVNADNTPI IFRWIPRASL IRWAFQGLCI
601: NEFSGLKFDH QNTFDVQTGE QALERLSFGG RRIRETIAAQ SRILMFWYSA TYLLLEKNKP KYQKLELLVD NGETGNSGVQ LDKAEVDQTE KPEDDDINQP
701: LDDQNQTSDS DDELDEIRPF VLEGL
Arabidopsis Description
ABCG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VSW5]
SUBAcon: [peroxisome,plastid,vacuole]
SUBAcon: [peroxisome,plastid,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.