Factsheet for PGSC0003DMT400032370

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	98.06	97.91
KRH27319	Soybean	cytosol, mitochondrion, plasma membrane	68.87	70.0
KRH21994	Soybean	cytosol, peroxisome, plasma membrane	68.55	69.56
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	67.42	68.19
AT1G53270.1	Thale cress	plasma membrane	60.81	63.9
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.32	63.61
CDY02516	Canola	cytosol, peroxisome, plasma membrane	60.32	63.61
CDY59400	Canola	cytosol, plasma membrane, plastid	60.16	63.44
PGSC0003DMT400052674	Potato	cytosol, peroxisome, plasma membrane	58.55	59.7
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	38.87	58.21
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	44.03	53.85
TraesCS3D01G231500.1	Wheat	mitochondrion, plastid	52.26	53.55
TraesCS3B01G251300.1	Wheat	plastid	52.26	53.55
TraesCS3A01G221400.1	Wheat	plastid	52.26	53.55
HORVU3Hr1G054160.1	Barley	plastid	52.42	53.45
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	51.61	52.55
Os01t0615500-00	Rice	plastid	51.94	52.53
EES03276	Sorghum	mitochondrion	51.45	52.12
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	47.9	46.33
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	39.68	41.28
PGSC0003DMT400062852	Potato	plastid	43.55	40.85
PGSC0003DMT400029838	Potato	extracellular	35.97	32.09
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	35.48	30.39
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	35.48	30.39
PGSC0003DMT400061466	Potato	plasma membrane	36.29	30.36
PGSC0003DMT400039671	Potato	plasma membrane	25.65	28.6
PGSC0003DMT400084876	Potato	cytosol	32.58	27.71
PGSC0003DMT400049667	Potato	cytosol, peroxisome, plasma membrane	27.26	27.57
PGSC0003DMT400039676	Potato	plasma membrane	27.58	27.19
PGSC0003DMT400002293	Potato	cytosol, peroxisome, plasma membrane	26.13	26.87
PGSC0003DMT400047547	Potato	cytosol, peroxisome, plasma membrane	28.39	26.59
PGSC0003DMT400004973	Potato	cytosol, peroxisome, plasma membrane	27.26	26.16
PGSC0003DMT400019318	Potato	cytosol, nucleus, peroxisome	27.42	25.19
PGSC0003DMT400050007	Potato	cytosol	31.94	23.8
PGSC0003DMT400054994	Potato	plastid	26.77	22.86
PGSC0003DMT400078356	Potato	extracellular, plasma membrane, vacuole	26.45	22.68
PGSC0003DMT400002062	Potato	cytosol	27.1	22.11

Protein Annotations

EntrezGene:102602720	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439
UniProt:M1AXB2	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	EnsemblPlantsGene:PGSC0003DMG400012432	PGSC:PGSC0003DMG400012432
EnsemblPlants:PGSC0003DMT400032370	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF441	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296AA89	RefSeq:XP_006348289.1	SEG:seg	:

Description

White-brown-complex ABC transporter family [Source:PGSC_GENE;Acc:PGSC0003DMG400012432]

Coordinates

chr7:-:52773758..52775823

Molecular Weight (calculated)

69171.8 Da

IEP (calculated)

8.642

GRAVY (calculated)

0.212

Length

620 amino acids

Sequence
(BLAST)

001: MELPVTTPDS GGKKKGSYTI ETKNLSYALP SLYDEFSWIF CCKNPKRPQK FIIKDVNCEA RPGEITAIAG PSGAGKTTLL EILAGKISPT KVTGEVLVNG
101: HPVNAKCFRR LSGYVTQEDA LFPLLTVEET LMYSALLRLQ GGKKEAANRV GVLIKELGLE QVTGARVGGG SNRGISGGER RRVSIGVELV HDPAVILIDE
201: PTSGLDSASA LHVISLLQVM VAHQGKTIVL TIHQPGFRIL ELFDRLVLLS NGGVLHNGSL EYLEERIKFS GLQIPPHINV LEFAIDVTGS IVIYTSETPN
301: VHFHIKDHGE KKESLRKYDE GFTVSNHNDM VDKCPSYANS YVEEISILGG RFCKNIFRTK QLFATRIIQA LVAGFILGSI FMNADNNLGQ VALQTRLGFF
401: AFSLTFLLST MTEGLPIFLQ ERTIFMRETS RGAYRVSSYV VANTIVFLPF LLMVGLLYSV PVYWLVGLRG SMDGFLYFAM VVWIVLLMSN SFTACFSALV
501: PTFIMGTSII AGLMGSFFLF SGYFLSKEKI PSYWIFMHYL SLFKYPFECF LINEYGGKGG KRCLESERGE CKLFAIDFLK QQDLKESLKW TNLAVMLSFI
601: LGYRVLCYLI LWCRCYRTRN

Best Arabidopsis Sequence Match ( AT1G53270.1 )
(BLAST)

001: MELPVKAPIP GGREISYRLE TKNLSYRIGG NTPKFSNLCG LLSEKEEKVI LKDVSCDARS AEITAIAGPS GAGKTTLLEI LAGKVSHGKV SGQVLVNGRP
101: MDGPEYRRVS GFVPQEDALF PFLTVQETLT YSALLRLKTK RKDAAAKVKR LIQELGLEHV ADSRIGQGSR SGISGGERRR VSIGVELVHD PNVILIDEPT
201: SGLDSASALQ VVTLLKDMTI KQGKTIVLTI HQPGFRILEQ IDRIVLLSNG MVVQNGSVYS LHQKIKFSGH QIPRRVNVLE YAIDIAGSLE PIRTQSCREI
301: SCYGHSKTWK SCYISAGGEL HQSDSHSNSV LEEVQILGQR SCKNIFRTKQ LFTTRALQAS IAGLILGSIY LNVGNQKKEA KVLRTGFFAF ILTFLLSSTT
401: EGLPIFLQDR RILMRETSRR AYRVLSYVLA DTLIFIPFLL IISMLFATPV YWLVGLRREL DGFLYFSLVI WIVLLMSNSF VACFSALVPN FIMGTSVISG
501: LMGSFFLFSG YFIAKDRIPV YWEFMHYLSL FKYPFECLMI NEYRGDVFLK QQDLKESQKW SNLGIMASFI VGYRVLGFFI LWYRCYRTRS

Arabidopsis Description

ABCG10ABCG10 [Source:UniProtKB/TrEMBL;Acc:A0A178WBC4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.