Factsheet for Solyc08g075430.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004973	Potato	cytosol, peroxisome, plasma membrane	98.61	98.61
Solyc08g005580.2.1	Tomato	cytosol, peroxisome, plasma membrane	86.38	85.19
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	80.81	79.45
KRH07778	Soybean	cytosol, peroxisome, plasma membrane	79.41	78.8
KRH07253	Soybean	cytosol, peroxisome, plasma membrane	79.1	77.9
KRH28987	Soybean	cytosol, peroxisome, plasma membrane	79.57	77.88
KRH76470	Soybean	cytosol, peroxisome, plasma membrane	79.26	77.69
CDY49155	Canola	cytosol, peroxisome, plasma membrane	75.39	75.04
AT1G31770.1	Thale cress	cytosol, nucleus, peroxisome	75.23	75.0
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	74.15	74.73
CDY47690	Canola	cytosol, peroxisome, plastid	74.15	74.73
CDY50951	Canola	cytosol, peroxisome, plastid	74.15	74.73
CDY12299	Canola	cytosol, peroxisome, plasma membrane	75.08	68.12
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	75.39	66.99
GSMUA_Achr2P04580_001	Banana	plasma membrane	58.05	62.6
CDY12359	Canola	cytosol, nucleus, plasma membrane	29.1	62.46
TraesCS4A01G370500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	63.93	60.65
TraesCS7A01G071700.1	Wheat	plastid	63.16	59.91
TraesCS7D01G067300.1	Wheat	cytosol, nucleus, plasma membrane, plastid	63.62	59.83
HORVU7Hr1G014870.1	Barley	cytosol, peroxisome, plasma membrane	63.16	59.56
Solyc04g006960.2.1	Tomato	cytosol, nucleus, peroxisome	58.67	56.15
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	64.55	55.97
Solyc07g063400.2.1	Tomato	cytosol, peroxisome, plasma membrane	51.7	54.49
Zm00001d024497_P001	Maize	plastid	61.15	54.33
EES13415	Sorghum	plastid	62.38	53.81
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	63.0	53.76
Solyc12g013630.1.1	Tomato	cytosol, peroxisome, plasma membrane	51.55	53.03
Solyc12g013640.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.93	52.22
Solyc11g018690.1.1	Tomato	cytosol	25.08	47.37
Solyc11g018680.1.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	20.9	46.55
Solyc01g006720.2.1	Tomato	plastid	45.82	40.88
Solyc07g065780.1.1	Tomato	mitochondrion	26.32	38.2
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.41	37.95
Solyc07g062630.1.1	Tomato	cytosol, peroxisome, plasma membrane	26.16	27.21
Solyc07g053300.1.1	Tomato	cytosol	25.08	26.64
Solyc03g113690.1.1	Tomato	plastid	26.63	26.14
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	24.46	25.73
Solyc05g008350.2.1	Tomato	nucleus, plastid	28.02	25.49
Solyc03g007690.1.1	Tomato	plastid	23.53	25.46
Solyc04g010210.1.1	Tomato	extracellular	26.01	23.53
Solyc05g054890.2.1	Tomato	cytosol	27.24	23.47
Solyc09g098410.1.1	Tomato	nucleus	26.47	23.46
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	25.85	23.26
Solyc09g005970.1.1	Tomato	plasma membrane	26.47	23.17
Solyc01g097430.2.1	Tomato	cytosol, nucleus	26.47	20.41

Protein Annotations

MapMan:11.4.4.1	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:K4CMR0	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF213	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc08g075430.2
EnsemblPlants:Solyc08g075430.2.1	TMHMM:TMhelix	UniParc:UPI000276B6E4	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:-:59564208..59567305

Molecular Weight (calculated)

72138.9 Da

IEP (calculated)

8.997

GRAVY (calculated)

0.056

Length

646 amino acids

Sequence
(BLAST)

001: MPLHCVAPKP ENFGTELMAA PPNSSKPEMN NSESFIQRAL FPITLKFEEV VYKIKQETKG MCCGGPSSTK EKTILNGVTG IVCPGEMLAM LGPSGSGKTT
101: LLTALGGRLS GKLSGKITYN SQPFSGAIKR RTGFVAQDDV LYPHLTVTET LLFTALLRLP QSLSREEKER HVEHVIVELG LNKCRNSMIG GPLFRGISGG
201: EKKRVSIGQE MLINPSLLLL DEPTSGLDST TALRILTTVK RLADGGRTVI TTIHQPSSRL YHMFDKVVLL SEGCPIYYGP ASTALEYFSS VGFSTSITIN
301: PADLLLDLAN GIGPDSKHAT EQGDNSEQEK KSVREALISA YDKNIYTRLK TELCSSDTNN YSYTKDVSTR NGAKSEHWCT SWGYQFKVLL LRGLKERRYE
401: TFNKLRIFQV VSVAFLAGLL WWHTPTSHIE DRIAMVFFFA VFWGFYPLYN AVFTFPQERR MLIKERSSGM YRLSSYFLAK TVGDLPLELA LPTAFTFILY
501: WMGGLKANPA TFILSLLVVL YSVLVSQSLG LAYGAMLMDV KQATTLASVT TLVFLIAGGY YIQQIPPFIV WLKYLSYSYY CYKLLLGVQY NDNDYYECSK
601: GVYCQVAEFP AIKSIGLNNM WMDVFIMALM LVGYRLIAYL ALNRVR

Best Arabidopsis Sequence Match ( AT1G31770.1 )
(BLAST)

001: MPQNCIAPRP EEDGGVMVQG LPDMSDTQSK SVLAFPTITS QPGLQMSMYP ITLKFEEVVY KVKIEQTSQC MGSWKSKEKT ILNGITGMVC PGEFLAMLGP
101: SGSGKTTLLS ALGGRLSKTF SGKVMYNGQP FSGCIKRRTG FVAQDDVLYP HLTVWETLFF TALLRLPSSL TRDEKAEHVD RVIAELGLNR CTNSMIGGPL
201: FRGISGGEKK RVSIGQEMLI NPSLLLLDEP TSGLDSTTAH RIVTTIKRLA SGGRTVVTTI HQPSSRIYHM FDKVVLLSEG SPIYYGAASS AVEYFSSLGF
301: STSLTVNPAD LLLDLANGIP PDTQKETSEQ EQKTVKETLV SAYEKNISTK LKAELCNAES HSYEYTKAAA KNLKSEQWCT TWWYQFTVLL QRGVRERRFE
401: SFNKLRIFQV ISVAFLGGLL WWHTPKSHIQ DRTALLFFFS VFWGFYPLYN AVFTFPQEKR MLIKERSSGM YRLSSYFMAR NVGDLPLELA LPTAFVFIIY
501: WMGGLKPDPT TFILSLLVVL YSVLVAQGLG LAFGALLMNI KQATTLASVT TLVFLIAGGY YVQQIPPFIV WLKYLSYSYY CYKLLLGIQY TDDDYYECSK
601: GVWCRVGDFP AIKSMGLNNL WIDVFVMGVM LVGYRLMAYM ALHRVKLR

Arabidopsis Description

ABCG14ABC transporter G family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W5]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.