Factsheet for HORVU5Hr1G060690.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G203200.1	Wheat	cytosol	98.07	81.63
TraesCS5D01G211000.1	Wheat	cytosol	97.93	80.68
TraesCS5A01G205100.1	Wheat	mitochondrion	97.66	78.41
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	88.0	72.75
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	64.28	72.25
Zm00001d024075_P001	Maize	cytosol	87.31	70.96
Os09t0401100-01	Rice	extracellular	83.17	68.99
VIT_17s0000g02200.t01	Wine grape	cytosol	64.55	66.38
KRH60557	Soybean	cytosol	71.31	64.71
KRH41868	Soybean	cytosol	70.07	63.98
PGSC0003DMT400050007	Potato	cytosol	71.03	61.9
Solyc01g097430.2.1	Tomato	cytosol, nucleus	70.9	61.34
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	36.41	39.52
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	36.83	39.21
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	36.97	35.4
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	36.97	35.4
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	37.24	34.22
HORVU3Hr1G054160.1	Barley	plastid	27.17	32.4
HORVU5Hr1G021110.1	Barley	cytosol	17.52	29.6
HORVU3Hr1G066220.1	Barley	plastid	31.03	28.23
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	21.24	27.8
HORVU1Hr1G056890.2	Barley	cytosol	24.14	26.72
HORVU3Hr1G005770.1	Barley	endoplasmic reticulum	13.79	26.18
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	23.59	26.07
HORVU7Hr1G081250.1	Barley	mitochondrion	23.45	25.76
HORVU4Hr1G058070.2	Barley	cytosol	28.83	25.64
HORVU4Hr1G018800.7	Barley	plastid	21.66	24.45
HORVU7Hr1G014870.1	Barley	cytosol, peroxisome, plasma membrane	23.03	24.38
HORVU4Hr1G072620.1	Barley	plastid	24.28	23.25
HORVU3Hr1G005830.3	Barley	cytosol	10.48	20.11
HORVU7Hr1G090350.4	Barley	cytosol, nucleus, plasma membrane	20.28	20.08

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	UniProt:A0A287RFJ1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:HORVU5Hr1G060690
EnsemblPlants:HORVU5Hr1G060690.4	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000B4669A8	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:475386562..475389525

Molecular Weight (calculated)

81559.3 Da

IEP (calculated)

8.646

GRAVY (calculated)

-0.025

Length

725 amino acids

Sequence
(BLAST)

001: SGQALRGQVT AILGPSGAGK STFLDAIAGR IAKGSLEGSV SIDGRPVTTS YMKQISSYVM QDDQLFPMLT VLETLTFAAE VRLPPSLSRA EKLKRVWELI
101: EQLGLQTTAH TYIGDEGVRG VSGGERRRVS IGTDIIHKPS LLFLDEPTSG LDSTSAYSVV EKVRDIAKGG SIVLMTIHQP SFRIQMLLDR IVILARGRLI
201: YLGNPTTLPT YLAGFGRPVP EGENSMEYLL DVIKEYDEST LGLEPLVAYQ RDGSKPTEAA KTPVPRTPRT PYQKSVQFRQ MQLKSNQFSL ASATPHANPF
301: SNFESYNIDD EEGDFDNSLE RKTQTPLHTV ASGYHPRLAS QFYKDFSVWV YNGVAGTPQR RPTWTPARTP ARTPMSSYQR SRVNTPHRSI PPSPQEPVFK
401: LEEPDYEEQG LDIEPLDAPE DGPKFANPWL REVAVLSWRT GLNVVRTPEL FLSREVVLTV MALILSTLFH RLSGSDFLTI NRILNFYIFA VCLVFFSSND
501: AVPTFIQERF IFIRERSHNA YRASTYVISS LIVYLPFFAI QGFTFAVITK FMLHLNSSLL YFWIVLFASL ITTNAYVMLV SALVPSYITG YAVVIATTAL
601: FFLTCGFFLK RNKIPIYWRW LHYISAIKYP FEALLVNEFK GSHCYTGTQN QLSPGPLGEI KQSSLHTQLN PNITTCPMIG QDVLTSMDIT MDSIWVDVAI
701: LLAWGVLYRL FFYVVLRFYS KNERK

Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)

001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

Arabidopsis Description

ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.