Factsheet for Os09t0401100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G060690.4	Barley	mitochondrion	68.99	83.17
TraesCS5B01G203200.1	Wheat	cytosol	77.46	77.73
TraesCS5D01G211000.1	Wheat	cytosol	77.92	77.39
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	77.35	77.08
Zm00001d024075_P001	Maize	cytosol	77.92	76.35
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	55.61	75.35
TraesCS5A01G205100.1	Wheat	mitochondrion	77.8	75.3
VIT_17s0000g02200.t01	Wine grape	cytosol	56.87	70.5
KRH60557	Soybean	cytosol	61.33	67.08
KRH41868	Soybean	cytosol	60.53	66.62
PGSC0003DMT400050007	Potato	cytosol	61.56	64.66
Solyc01g097430.2.1	Tomato	cytosol, nucleus	61.9	64.56
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	41.3	52.02
Os05t0120000-00	Rice	plasma membrane	32.15	41.32
Os05t0120200-01	Rice	plasma membrane	32.49	40.63
Os01t0836600-01	Rice	plasma membrane	32.04	37.38
Os03t0281900-01	Rice	cytosol, plasma membrane	32.95	36.59
Os01t0615500-00	Rice	plastid	24.14	34.42
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	16.13	29.01
Os11t0177400-01	Rice	plasma membrane	15.33	28.33
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	20.25	26.22
Os06t0607700-01	Rice	plasma membrane	20.59	26.16
Os03t0282100-00	Rice	cytosol, nucleus, plastid	22.77	25.98
Os01t0121700-01	Rice	plasma membrane	19.68	25.75
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	21.74	24.64
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	20.14	23.25

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	EntrezGene:4346998	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:BAT07971.1	ncoils:Coil	UniProt:G9I8W9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EMBL:JN608807	EnsemblPlantsGene:Os09g0401100
EnsemblPlants:Os09t0401100-01	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893
PANTHER:PTHR19241	PANTHER:PTHR19241:SF180	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0000DD970C
RefSeq:XP_015612618.1	SEG:seg	:	:	:	:

Description

ABC TRANSPORTER G FAMILY MEMBER 21Half-size ABC transporter, Mycorrhizal arbuscule formation (Os09t0401100-01)

Coordinates

chr9:+:14046728..14050594

Molecular Weight (calculated)

96661.9 Da

IEP (calculated)

9.723

GRAVY (calculated)

-0.210

Length

874 amino acids

Sequence
(BLAST)

001: MQQQQRSREM ARAGEPAAAH RHRAERAAAG EPATRTHRTE RAGEPAAATT TTTTRRPPPT TTERKESLES LLDATDAARG GRRGGGGVKA AVASRQGLEF
101: KNLSYSVVKK QKKEGVKVKK EVYLLNDISG EAPRGQVTAI LGPSGAGKST FLDALAGRIA KGSLEGSVRI DGRAVTTSYM KQISSYVMQD DQLFPMLTVL
201: ETLTFAAEVR LPPSLSRAEK LKRVWELIDQ LGLQTTAHTY IGDEGTRGVS GGERRRVSIG IDIIHKPSLL FLDEPTSGLD STSAHSVVEK VKDIARGGSI
301: VLMTIHQPSF RIQMLLDRLV ILARGRLIYL GSPSTLQTHL AGFGRPVPDG ENSIEYLLDV IKEYDESTSG LEPLVAYQRD GTKPDGAAKT PVPRTPRTPH
401: QKSVQFRQIQ LKSNQFSLNS GAANGNTFSN FESSYNVDGG GDDDDEDFDN SLERKLQTPM HAGGPASGYQ PRLASQFYKD FSVWVYHGVT GSTPHRRPTW
501: TPARTPVSSF QRGRAVTMTP TPQNNPQRRP PPPPSPHVPV FKPEEPTYHE YELDLEPPLD APEEDYNGGH RPKFANPWPR EVAVLSWRTV LNVVRTPELF
601: LSREVVLAAM AVILSTMFRR LGAGDVPTVN RLLNFYIFAV CLVFFSSNDA VPTFIQERFI FIRERSHNAY RASSYVVASL VVYLPFFAVQ GLTFAVITKL
701: MLRMESSLLH FWVILFASLI TTNAYVMLVS ALVPSYITGY AVVIATTALF FLTCGFFLKR TLIPVGWRWL HYASAIKYPF EALLVSEFKG GRCYAGDRAD
801: LSPGPLGGFK PSSLRRELNA SDAACPLMGQ DVLSTLDITI DSIWVDVAIL LAWGVLYRLL FYVVLRFYSK NERK

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.