Factsheet for Os01t0836600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	83.71	84.16
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	82.51	83.18
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	83.85	83.07
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	83.85	82.96
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	83.85	82.96
TraesCS3B01G387500.1	Wheat	plastid	83.85	82.96
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	83.71	82.94
Zm00001d042953_P001	Maize	plasma membrane	83.04	81.73
CDY44641	Canola	plasma membrane	28.7	72.39
Bra005049.1-P	Field mustard	plasma membrane	28.3	71.38
Bra005051.1-P	Field mustard	plastid	56.07	68.4
CDX74853	Canola	plastid	56.07	68.07
Os05t0120000-00	Rice	plasma membrane	57.54	63.38
Os05t0120200-01	Rice	plasma membrane	59.15	63.38
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	60.75	62.85
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	60.48	62.57
KRH67592	Soybean	plastid	61.15	62.4
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.81	62.4
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	60.48	62.31
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.08	62.25
PGSC0003DMT400029838	Potato	extracellular	57.54	62.01
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	60.08	61.98
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	60.88	61.96
CDX69629	Canola	plastid	60.08	61.81
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	61.42	61.33
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	60.21	61.28
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	60.08	61.14
Solyc05g054890.2.1	Tomato	cytosol	61.15	61.07
AT2G39350.1	Thale cress	cytosol	60.08	60.81
Solyc04g010210.1.1	Tomato	extracellular	57.81	60.64
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	60.08	60.48
AT3G53510.1	Thale cress	plasma membrane	59.28	60.08
CDY09810	Canola	plastid	60.08	59.84
CDX93388	Canola	plasma membrane	58.88	59.51
Solyc09g005970.1.1	Tomato	plasma membrane	58.61	59.49
PGSC0003DMT400061466	Potato	plasma membrane	58.61	59.24
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.61	59.16
CDY18451	Canola	cytosol, peroxisome, plasma membrane	58.48	59.03
AT3G55100.1	Thale cress	cytosol, peroxisome, plasma membrane	52.07	58.91
CDY02907	Canola	cytosol, peroxisome, plasma membrane	49.67	58.58
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	58.61	58.15
Os03t0281900-01	Rice	cytosol, plasma membrane	60.75	57.81
CDX73549	Canola	cytosol, peroxisome, plasma membrane	58.21	57.67
CDX76121	Canola	cytosol	36.05	57.32
AT3G55110.1	Thale cress	cytosol, peroxisome, plasma membrane	53.67	56.78
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.34	56.08
CDX76119	Canola	cytosol, peroxisome, plasma membrane	49.53	55.62
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.47	55.51
CDX67624	Canola	cytosol, peroxisome, plasma membrane	52.34	55.45
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.34	55.45
CDY40201	Canola	cytosol	52.34	55.37
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.54	54.37
AT3G55130.1	Thale cress	mitochondrion, peroxisome, plasma membrane	51.4	53.1
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.33	52.73
CDY65003	Canola	cytosol, peroxisome, plasma membrane	50.2	52.66
CDY37656	Canola	cytosol, peroxisome, plasma membrane	50.07	52.59
CDX73404	Canola	plasma membrane	52.6	49.94
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.34	46.19
CDY50899	Canola	cytosol	19.36	43.54
Bra014774.1-P	Field mustard	plasma membrane	36.72	43.44
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	36.58	39.48
Os03t0282100-00	Rice	cytosol, nucleus, plastid	36.98	36.16
Os01t0615500-00	Rice	plastid	29.37	35.89
CDX76122	Canola	plasma membrane	61.15	35.73
Bra014776.1-P	Field mustard	cytosol	61.15	35.67
CDY02906	Canola	plasma membrane	60.75	35.41
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	20.96	32.3
Os09t0401100-01	Rice	extracellular	37.38	32.04
Os05t0384600-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	27.5	30.52
Os06t0607700-01	Rice	plasma membrane	25.77	28.05
Os11t0177400-01	Rice	plasma membrane	17.49	27.7
Os01t0121700-01	Rice	plasma membrane	24.7	27.69
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	26.3	25.55
Os08t0167000-01	Rice	cytosol, nucleus, plasma membrane	24.57	24.31

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ProteinID:BAB89748.1	ProteinID:BAF06646.1	ProteinID:BAS75110.1	ProteinID:EAZ14071.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	EnsemblPlantsGene:Os01g0836600	EnsemblPlants:Os01t0836600-01
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF453	UniProt:Q8S1S3	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI00000A632E
SEG:seg	:	:	:	:	:

Description

ABC TRANSPORTER G FAMILY MEMBER 3ABC transporter-like domain containing protein. (Os01t0836600-01)

Coordinates

chr1:+:35861267..35863888

Molecular Weight (calculated)

81078.3 Da

IEP (calculated)

9.485

GRAVY (calculated)

0.207

Length

749 amino acids

Sequence
(BLAST)

001: MARAVHDRLP FLATPPPAPA RGRNPPLAEM LRLVGAATVD SDAAAAAADE EANALSLPLP RGGVTPPPPG GRTIQFRLAF TSLTYSVRAA RRARPGGGDG
101: GGGFRLPLQN RCDRVTAAAP DAHSSRARVL LDGITGEARE GEILAVMGAS GSGKSTLIDA LANRISRDAL KGSVTLNGEP LTGNVIKSIS AYVMQDDLLF
201: PMLTVAETLS FAAEFRLPRA LPAAKKRTRV LELIEQLGLR AAADTIIGDE GHRGVSGGER RRVSIGTDII HDPILLFLDE PTSGLDSTSA FMVVQVLRNI
301: AESGSIVITS IHQPSQRILG LLDRLILLSG GRTVFSGPPS AIPAYFAEFG YPVPDDENRA EFALDLIREF ESLPAGTGQL VSFNKTWQVM HAARHNPNDD
401: PWAPTMSLKE AISASISRGK LVSGSDVAGE AASMHTYANP FWVEMKVLTK RSAINTRRMP ELFLIRLGAV VITGAILATV FYKLDQSPKG AQERLGFFAF
501: AMSTMFYTCA DALPVFLHER YIFLRETAYG AYRRTSYVLS NAIVSFPPLV VLSLAFAFTT FFAVGLAGGV SGFAFYTLAI LASFWAGSGF VTFLSGVIPH
601: VMIGYTVVVA ILAYFLLFSG FFINRDRIPD YWIWFHYLSL VKYPFEGVLQ NEFGRGGECY VRGTQMFDNS PLAVLPDTVK TRVLASIGTA LGVKIGPNTC
701: VMTGHNVLRE AAVTQLGKWE CLLVTAAWGF FFRLLFYFSL VLGSKNKRR

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.