Factsheet for VIT_08s0040g02840.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67592	Soybean	plastid	74.59	74.8
KRG95875	Soybean	cytosol, peroxisome, plasma membrane	74.32	74.32
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.86	73.76
Solyc09g005970.1.1	Tomato	plasma membrane	73.1	72.9
AT3G53510.1	Thale cress	plasma membrane	73.1	72.8
PGSC0003DMT400061466	Potato	plasma membrane	72.96	72.47
CDX93388	Canola	plasma membrane	71.06	70.58
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	70.65	70.08
CDY18451	Canola	cytosol, peroxisome, plasma membrane	70.65	70.08
AT2G37360.1	Thale cress	cytosol, peroxisome, plasma membrane	70.92	69.14
CDX73549	Canola	cytosol, peroxisome, plasma membrane	68.48	66.67
GSMUA_Achr5P28450_001	Banana	plasma membrane	62.64	66.05
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	63.04	65.72
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.34	61.97
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	62.5	61.91
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.2	61.82
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	57.07	61.67
Os05t0120200-01	Rice	plasma membrane	58.42	61.52
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.79	61.38
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	65.76	61.27
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	61.96	61.21
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	57.47	61.13
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	57.61	61.1
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	65.62	60.98
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	62.64	60.9
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	62.64	60.9
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	65.76	60.8
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	65.62	60.68
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.83	60.64
TraesCS3B01G387500.1	Wheat	plastid	62.36	60.63
Os05t0120000-00	Rice	plasma membrane	55.98	60.59
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	62.23	60.58
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	62.23	60.58
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	57.61	60.57
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	54.89	60.48
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	58.29	60.25
Os01t0836600-01	Rice	plasma membrane	61.14	60.08
Zm00001d042953_P001	Maize	plasma membrane	61.96	59.92
Zm00001d035553_P001	Maize	plasma membrane	58.02	59.8
Os03t0281900-01	Rice	cytosol, plasma membrane	63.86	59.72
EES17614	Sorghum	cytosol, peroxisome, vacuole	57.61	59.72
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	53.67	58.52
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	53.4	58.22
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	65.49	57.31
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	69.29	53.91
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	57.2	53.36
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	63.45	51.95
HORVU4Hr1G058070.2	Barley	cytosol	51.22	46.26
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	39.95	44.82
HORVU5Hr1G021110.1	Barley	cytosol	25.14	43.12
VIT_17s0000g02200.t01	Wine grape	cytosol	39.81	41.56
Os03t0282100-00	Rice	cytosol, nucleus, plastid	38.04	36.55
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	29.76	35.73
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	28.12	34.91
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	29.76	34.49
GSMUA_Achr6P08820_001	Banana	plasma membrane	56.52	33.66
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	28.26	33.17
VIT_16s0050g01620.t01	Wine grape	cytosol	26.9	33.17
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.27	29.86
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.27	27.51
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.46	27.4
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.18	26.81
VIT_08s0032g00790.t01	Wine grape	plastid	26.63	26.2
VIT_19s0015g00960.t01	Wine grape	peroxisome	23.64	25.36
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.59	23.32
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	22.69	22.91

Protein Annotations

EntrezGene:100253445	wikigene:100253445	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CCB57018	ProteinID:CCB57018.1	UniProt:F6HQX0	EMBL:FN596008
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
EntrezGene:LOC100253445	wikigene:LOC100253445	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI000210858B	ArrayExpress:VIT_08s0040g02840	EnsemblPlantsGene:VIT_08s0040g02840	EnsemblPlants:VIT_08s0040g02840.t01	unigene:Vvi.22565	RefSeq:XP_002277271
RefSeq:XP_002277271.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:+:13903031..13905474

Molecular Weight (calculated)

81614.3 Da

IEP (calculated)

9.024

GRAVY (calculated)

0.166

Length

736 amino acids

Sequence
(BLAST)

001: MELQEPVWRS KLRVSPTLGE LLKRVGDARD DTPGCQTTSS HQRVIDLNDA IPHPRSFPFV LSFHNLSYSV KVRRKMKFPG LFCWKEGPGL SEDEVETKDS
101: GMKVLLNDIS GEAREGEIMG VLGASGSGKS TLIDALADRI AKDSLKGSVT LNDEVLESKL LKVISAYVMQ DDLLFPMLTV EETLMFSAEF RLPRSLSSSK
201: KKARVQALID QLGLRSAAKT VIGDEGHRGV SGGERRRVSI GIDIIHDPIV LFLDEPTSGL DSTSAFMVVK VLQRIAQSGS IVIMSIHQPS YRILGLLDRL
301: IFLSRGNTVY SGSPSSLPLF FAEFGHPIPE TENRTEFALD LIRELEGSPG GTKTLVEFNK SWQRMTNPQT DVEEGAKPSL KDAISASISR GKLVSGASND
401: ANPASLVPTF ANPIWIEMVV LGKRSLKNSK RMPELFGIRL GAVLVTGIIL ATIFLQLDSS PKGVQERLGF FAFAMSTTFY TCAEAIPVFL QERYIFMRET
501: AYNAYRRSSY VLAHSIISIP ALVFLSFAFA ATTYWAVGLA GGVSGFLFFF FMIFASFWAG SSFVTFLSGV VSHVMLGYTV VVAILAYFLL FSGFFISRNR
601: IPPYWIWFHY ISLVKYPYEG VLHNEFEDPM KCFVRGIQMF DNTPLGAVPE ALKVRLLKSM SDTLGMSITS STCVTTGSDV LKQQGVTDIS KWNCLWITLA
701: LGFFFRFMFY LTLLFGSKNK RTLKTVQSLS LPCFNL

Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)

001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK

Arabidopsis Description

ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.