Factsheet for VIT_17s0000g02200.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
plasma membrane 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	65.53	71.63
KRH60557	Soybean	cytosol	75.18	66.33
KRH41868	Soybean	cytosol	74.33	66.0
HORVU5Hr1G060690.4	Barley	mitochondrion	66.38	64.55
PGSC0003DMT400050007	Potato	cytosol	75.32	63.82
Solyc01g097430.2.1	Tomato	cytosol, nucleus	75.32	63.37
TraesCS5B01G203200.1	Wheat	cytosol	71.91	58.21
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	71.91	57.81
TraesCS5D01G211000.1	Wheat	cytosol	71.77	57.5
Os09t0401100-01	Rice	extracellular	70.5	56.87
Zm00001d024075_P001	Maize	cytosol	71.77	56.73
TraesCS5A01G205100.1	Wheat	mitochondrion	71.77	56.04
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.56	39.81
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.13	38.82
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	29.08	33.44
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	29.5	32.76
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	26.67	31.7
VIT_16s0050g01620.t01	Wine grape	cytosol	25.82	30.49
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.82	29.03
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.39	28.73
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.67	27.55
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.25	26.33
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.68	26.2
VIT_08s0032g00790.t01	Wine grape	plastid	26.1	24.6
VIT_19s0015g00960.t01	Wine grape	peroxisome	23.55	24.2
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	24.26	23.46
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	25.11	22.81

Protein Annotations

MapMan:24.1.3.2.2	MapMan:26.9.4.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	ProteinID:CBI15591	ProteinID:CBI15591.3	UniProt:D7SJD0	EMBL:FN594950	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180
SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001BE0AF4	ArrayExpress:VIT_17s0000g02200	EnsemblPlantsGene:VIT_17s0000g02200
EnsemblPlants:VIT_17s0000g02200.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:1829898..1832876

Molecular Weight (calculated)

79542.6 Da

IEP (calculated)

9.590

GRAVY (calculated)

0.000

Length

705 amino acids

Sequence
(BLAST)

001: MAKVSRTGRN RNLETLLVMD KSVKIENQAV THEPRKMIPG QGLEFSNLSY SVPKQQKKDG ATITKEVYLL NDLSGQAVRG EIMAILGPSG AGKSTFLDAL
101: AGRIARGSLE GSVKINGKPV SASYMKMVSS YVMQDDQLFA MLTVFETLMF AAEVRLPPSI SRSEKRKRVF ELIDQLGLQS ATHTYIGNEG RRGVSGGERR
201: RVSIGIDIIH KPPLLFLDEP TSGLDSTSAY SVVEKVQDIA RSGSIVLMTI HQPSFRIQML LDRITVLARG RLIYTGRPTD LPTYLSAFGR PVPDGENSLE
301: YLLDVIKEYD ESTIGVDPLV LYQRDGIKPD QVARTPIPKT PKTPNTPYRK TPASQLFSLR SQPFSTGNST PRLDAHYNDD DDDDFDNSLE RKIATPKHFH
401: GKHRAKFANP WLREVAVLSW RNILNIIRTP ELFLSREIVL LVMALILSSL FPNLGDDSLK TVNRLLNFYI FAVCLVFFSS NDAVPTFIQE RFIFMRETAH
501: NAYRASSYVV SSLIVYLPFF AIQGLTFAMI TRYILHLKSD VIFFWLILYA SLITTNAYVM LVSALVPSYI TGYAVVIATT ALFFLSCGFF LKRTKIPNYW
601: IWLHYISAIK YPFEALLINE FQGTRCYKGS PADLSPGPLG NLNYSPEHNK FVSINCTLIG DDILSSMDLQ LKNIWYDIAI LLGWGVLYRL FFYVVLRFYS
701: KNERK

Best Arabidopsis Sequence Match ( AT3G55090.1 )
(BLAST)

001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR

Arabidopsis Description

ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.