Factsheet for VIT_13s0067g03750.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	77.38	79.83
Solyc05g054890.2.1	Tomato	cytosol	78.71	78.4
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	78.58	78.27
Bra005051.1-P	Field mustard	plastid	63.45	77.2
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	74.7	77.07
CDX74853	Canola	plastid	63.45	76.82
PGSC0003DMT400029838	Potato	extracellular	71.08	76.4
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	74.16	76.31
CDX69629	Canola	plastid	74.3	76.24
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	73.09	76.04
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	73.36	75.38
Solyc04g010210.1.1	Tomato	extracellular	71.75	75.07
VIT_08s0040g02840.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.76	74.86
CDY09810	Canola	plastid	74.16	73.67
AT2G39350.1	Thale cress	cytosol	71.89	72.57
AT3G55090.1	Thale cress	cytosol, peroxisome, plasma membrane	70.55	71.6
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	70.68	70.97
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	65.19	68.98
GSMUA_Achr5P28450_001	Banana	plasma membrane	63.32	67.77
Os05t0120200-01	Rice	plasma membrane	59.97	64.09
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	63.32	63.66
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	63.32	63.49
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	66.8	63.16
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	57.43	63.0
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	63.72	62.88
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	63.72	62.88
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.16	62.7
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	66.4	62.63
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	63.32	62.57
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	63.32	62.57
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.03	62.56
Os05t0120000-00	Rice	plasma membrane	56.89	62.5
TraesCS3B01G387500.1	Wheat	plastid	63.32	62.48
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	66.53	62.44
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	66.4	62.31
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.76	62.26
Os01t0836600-01	Rice	plasma membrane	62.25	62.08
Zm00001d042953_P001	Maize	plasma membrane	63.19	62.02
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	57.43	61.82
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	57.16	61.71
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	57.7	61.57
EES17614	Sorghum	cytosol, peroxisome, vacuole	58.37	61.41
Os03t0281900-01	Rice	cytosol, plasma membrane	64.52	61.25
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	54.62	61.08
Zm00001d035553_P001	Maize	plasma membrane	58.37	61.06
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.1	60.78
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	57.7	60.53
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	53.55	59.26
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	53.28	58.96
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	66.13	58.74
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	57.43	54.37
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	65.06	54.06
HORVU4Hr1G058070.2	Barley	cytosol	52.21	47.85
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	40.56	46.19
HORVU5Hr1G021110.1	Barley	cytosol	25.57	44.52
VIT_17s0000g02200.t01	Wine grape	cytosol	38.82	41.13
CDX76122	Canola	plasma membrane	70.01	40.8
CDY02906	Canola	plasma membrane	70.15	40.78
Bra014776.1-P	Field mustard	cytosol	70.01	40.73
Os03t0282100-00	Rice	cytosol, nucleus, plastid	38.82	37.86
VIT_19s0014g01540.t01	Wine grape	cytosol, plasma membrane, plastid	28.78	35.07
VIT_12s0028g02360.t01	Wine grape	cytosol, mitochondrion, plasma membrane, plastid	27.58	34.74
GSMUA_Achr6P08820_001	Banana	plasma membrane	57.43	34.71
VIT_16s0050g01620.t01	Wine grape	cytosol	27.18	34.0
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	28.78	33.86
VIT_06s0009g03380.t01	Wine grape	cytosol, peroxisome, plasma membrane	27.18	32.38
VIT_19s0014g03280.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.9	29.86
VIT_01s0011g02730.t01	Wine grape	cytosol, peroxisome, plasma membrane	26.37	29.14
VIT_18s0072g01220.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.5	27.56
VIT_02s0087g00840.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.83	27.09
VIT_08s0032g00790.t01	Wine grape	plastid	27.04	27.01
VIT_19s0015g00960.t01	Wine grape	peroxisome	23.03	25.07
VIT_01s0011g04670.t01	Wine grape	mitochondrion, plasma membrane	23.29	23.87
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	23.56	22.68

Protein Annotations

EntrezGene:100854814	wikigene:100854814	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:CCB49753	ProteinID:CCB49753.1	ncoils:Coil	UniProt:F6HC15
EMBL:FN595514	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	EntrezGene:LOC100854814	wikigene:LOC100854814	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI0002109DFD	ArrayExpress:VIT_13s0067g03750	EnsemblPlantsGene:VIT_13s0067g03750	EnsemblPlants:VIT_13s0067g03750.t01	RefSeq:XP_003633443
RefSeq:XP_003633443.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:-:2094811..2097217

Molecular Weight (calculated)

82533.0 Da

IEP (calculated)

9.068

GRAVY (calculated)

0.131

Length

747 amino acids

Sequence
(BLAST)

001: MSRFVTGNIP PARDNGEVFD WRQTMEDEEL TVSSSGPSPT LGHLLKCVGD VRKEVTGDET PVHQVLEMGE ANMEPRSLPF VLSFSNLTYS VNVRRKMALP
101: AIFRRTSQLG VATADHIPGE SMLTGTKTLL NDISGEARDG EILAVLGASG SGKSTLIDAL ANRIAKGSLK GAVTLNGEAL ESRLLKVISA YVMQDDLLYP
201: MLTVEETLMF AAEFRLPRTL SKSKKKARVE ALIDQLGLRN AAKTVIGDEG HRGVSGGERR RVSIGIDIIH DPIILFLDEP TSGLDSTSAF MVVKVLQRIA
301: QSGSIVIMSV HQPSYRILGL LDRLIFLSRG QTVYSGPPMN LPLFFAEFGH PIPPDNENRT EFALDLIREL EGSPGGTKSL VEFNKQWQST KHTRSYEAGT
401: NGLSMKEAIS ASISKGKLVS GATNDASSTS LVPTFANSFW VEMAVLSKRS ITNSRRMPEL FGIRLGAVLI TGFILATIYW QLDNSPKGAQ ERLGFFAFAM
501: STTFYTCADA LPVFLQERYI FLRETAYNAY RRSSYVLSHS LTSLPALIFL SFAFAATTFF AVGLDGGLSG FLFYFLIIFA SFWAGNSFVT FLSGVVPHVM
601: LGYTIVVALL AYFLLFSGFF INRNRIPSYW IWFHYVSLVK YPYEGVLQNE FNDPAKCYVR GVQIFDNTPL GAVSQAMKVN LLKSLSNTLG MEITSSTCVT
701: TGVDILKQQG ITDLSKWNCL WVTVAWGFFF RILFYFALLM GSKNKRR

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.