Factsheet for Bra005051.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005049.1-P	Field mustard	plasma membrane	48.37	100.0
CDX74853	Canola	plastid	99.84	99.35
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	100.0	82.53
AT2G39350.1	Thale cress	cytosol	92.51	76.76
Bra008817.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	79.15	66.94
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	77.2	65.47
PGSC0003DMT400029838	Potato	extracellular	73.62	65.04
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	78.01	63.87
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.2	63.45
Solyc05g054890.2.1	Tomato	cytosol	77.04	63.07
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	74.27	62.98
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	73.62	62.95
Solyc04g010210.1.1	Tomato	extracellular	72.48	62.32
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.96	60.38
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	68.08	59.21
Os05t0120200-01	Rice	plasma membrane	66.29	58.23
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.94	58.05
GSMUA_Achr5P28450_001	Banana	plasma membrane	65.96	58.02
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	64.33	58.0
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.01	57.71
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	64.01	57.71
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	66.78	57.42
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	63.68	57.42
Os05t0120000-00	Rice	plasma membrane	63.52	57.35
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	64.82	57.35
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.8	57.14
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	64.33	57.08
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	66.12	57.02
Zm00001d035553_P001	Maize	plasma membrane	66.29	57.0
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	64.82	56.86
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.66	56.8
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	68.57	56.66
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	68.57	56.51
Os01t0836600-01	Rice	plasma membrane	68.4	56.07
EES17614	Sorghum	cytosol, peroxisome, vacuole	64.82	56.06
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	60.91	55.99
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	68.89	55.88
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	68.89	55.88
TraesCS3B01G387500.1	Wheat	plastid	68.89	55.88
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	68.73	55.82
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	68.73	55.82
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	71.5	55.57
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.66	55.52
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.17	55.49
Zm00001d042953_P001	Maize	plasma membrane	68.4	55.19
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	71.17	54.9
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	60.1	54.67
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	70.2	54.42
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	70.2	54.15
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	59.28	53.93
Os03t0281900-01	Rice	cytosol, plasma membrane	68.24	53.24
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	70.2	51.25
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	64.66	50.32
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.66	46.51
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	67.26	45.94
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	46.58	43.6
Bra014774.1-P	Field mustard	plasma membrane	43.49	42.18
Bra014776.1-P	Field mustard	cytosol	85.67	40.97
HORVU4Hr1G058070.2	Barley	cytosol	52.93	39.88
HORVU5Hr1G021110.1	Barley	cytosol	24.76	35.43
Bra002234.1-P	Field mustard	cytosol	27.36	35.0
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.25	33.67
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.55	32.59
Bra013916.1-P	Field mustard	plastid	29.8	31.94
Bra022614.1-P	Field mustard	plastid	30.29	31.58
Os03t0282100-00	Rice	cytosol, nucleus, plastid	37.78	30.29
GSMUA_Achr6P08820_001	Banana	plasma membrane	60.59	30.1
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.83	27.23
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.99	26.93
Bra007999.1-P	Field mustard	plasma membrane	28.34	26.4
Bra019051.1-P	Field mustard	plasma membrane	26.55	25.59
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	25.9	24.8
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.71	24.55
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.41	24.45
Bra025152.1-P	Field mustard	plastid	19.06	23.64
Bra009203.1-P	Field mustard	plasma membrane	27.85	22.65
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.76	22.32
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.2	22.21
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.57	21.6
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.43	20.35
Bra033441.1-P	Field mustard	plastid	26.87	14.58

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra005051	EnsemblPlants:Bra005051.1	EnsemblPlants:Bra005051.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	InterPro:IPR003439	UniProt:M4CLG4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI00025474D9	SEG:seg	:	:	:

Description

AT2G39350 (E=2e-306) | ABC transporter family protein

Coordinates

chrA05:+:3177024..3178868

Molecular Weight (calculated)

67928.2 Da

IEP (calculated)

10.129

GRAVY (calculated)

0.245

Length

614 amino acids

Sequence
(BLAST)

001: MAVLGASGSG KSTLIDALAN RIAKGSLKGT VKLNGETLQS RTLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK SKKKLRVQAL IEQLGIKNAA
101: KTIIGDEGHR GISGGERRRV SIGIDIIHDP ILLFLDEPTS GLDSTSAYMV VKVLKRIAQS GSIVIMSIHQ PSHRVLGLLN RLIFLSRGNT VFSGSPGSLP
201: RFFAEFGSPI PENENRTEFA LDLIRELEGS AGGTRGLIEF NKKWQEMKKE NNRQPPLTPP ASPYPNLTLK EAIAASISRG KLVSGGESAT ATAATTLTVP
301: AFANSIWIEI VTLSKRSMLN SRRQPELFGI RLASVVITGF ILATVFWRID NSPKGVQERL GFFAFAMSTM FYTCAEALPV FLQERYIFMR ETAYNAYRRS
401: SYVLSHAIVA FPSLIFLSVA FAATTFWAVG LDGGPMGFLF YCLIILASFW SGSSFVTFLS GIVPHVMLGY TIVVAILAYF LLFSGFFINR NRIPDYWIWF
501: HYMSLVKYPY EAVLQNEFSD ATKCFVRGVQ IFDNTPLGVL PEGMKLRLLD SVSRSLGTTI SSSTCLTTGA DILTQQGVTQ LSKWNCLLIT VGFGFFFRAL
601: FYFCLLLGSK NKRR

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.