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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68292 Canola cytosol, peroxisome, plasma membrane 99.08 99.08
CDY36671 Canola plasma membrane 51.54 96.82
Bra016095.1-P Field mustard cytosol, peroxisome, plasma membrane 89.23 87.75
CDY36670 Canola cytosol 48.62 87.05
Bra007999.1-P Field mustard plasma membrane 86.77 85.58
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 85.23 83.69
PGSC0003DMT400002293 Potato cytosol, peroxisome, plasma membrane 60.62 65.34
Solyc11g018680.1.1 Tomato golgi, mitochondrion, plasma membrane, plastid 28.77 64.48
VIT_18s0072g01220.t01 Wine grape cytosol, peroxisome, plasma membrane 62.62 61.3
Solyc11g018690.1.1 Tomato cytosol 32.0 60.82
KRG91794 Soybean cytosol, peroxisome, plasma membrane, plastid 62.62 60.75
KRH34992 Soybean cytosol, plasma membrane, plastid 62.31 60.54
Os11t0177400-01 Rice plasma membrane 41.69 57.29
GSMUA_Achr6P25480_001 Banana cytosol, peroxisome, plastid 56.62 57.05
GSMUA_Achr11P... Banana plasma membrane 52.62 56.44
Zm00001d053049_P001 Maize plasma membrane 52.62 53.77
Zm00001d004762_P001 Maize plasma membrane 51.85 53.32
TraesCS4D01G092000.1 Wheat plasma membrane 51.85 52.01
KXG27901 Sorghum plasma membrane, plastid 51.85 51.93
TraesCS4B01G095200.1 Wheat plastid 51.38 51.86
HORVU4Hr1G018800.7 Barley plastid 51.08 51.71
TraesCS4A01G216900.1 Wheat plasma membrane, plastid 51.23 51.47
GSMUA_Achr9P08630_001 Banana cytosol, peroxisome, plasma membrane 52.31 50.15
Bra019051.1-P Field mustard plasma membrane 47.54 48.51
Bra026352.1-P Field mustard cytosol, peroxisome, plasma membrane 46.92 47.81
Bra033878.1-P Field mustard cytosol, peroxisome, plastid 46.46 47.11
Bra026514.1-P Field mustard cytosol, peroxisome, plasma membrane 47.23 45.96
Bra023202.1-P Field mustard cytosol, peroxisome, plasma membrane 45.85 40.99
Bra025152.1-P Field mustard plastid 30.62 40.2
Bra009203.1-P Field mustard plasma membrane 42.92 36.95
Bra028729.1-P Field mustard cytosol, peroxisome, plasma membrane 42.31 36.57
Bra039378.1-P Field mustard cytosol, peroxisome, plasma membrane 37.69 35.98
Bra005051.1-P Field mustard plastid 27.23 28.83
Bra013141.1-P Field mustard cytosol, peroxisome, plasma membrane 27.08 27.85
Bra002234.1-P Field mustard cytosol 20.31 27.5
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 29.54 26.45
Bra030948.1-P Field mustard cytosol, peroxisome, plasma membrane 23.85 26.36
Bra022614.1-P Field mustard plastid 23.85 26.32
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 28.0 26.04
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 28.0 25.74
Bra013916.1-P Field mustard plastid 22.62 25.65
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 29.23 25.54
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 27.38 25.14
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 27.38 25.07
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 28.46 24.93
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 27.38 24.9
Bra033441.1-P Field mustard plastid 41.23 23.67
Bra014326.1-P Field mustard cytosol, peroxisome, plasma membrane 26.46 23.34
Bra005049.1-P Field mustard plasma membrane 10.62 23.23
Bra014774.1-P Field mustard plasma membrane 21.69 22.27
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 28.46 19.56
Bra014776.1-P Field mustard cytosol 29.38 14.88
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeEnsemblPlantsGene:Bra003903
EnsemblPlants:Bra003903.1EnsemblPlants:Bra003903.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
InterPro:IPR003439UniProt:M4CI70InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PFscan:PS50893
PANTHER:PTHR19241PANTHER:PTHR19241:SF225SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI000254181E
SEG:seg:::::
Description
AT1G71960 (E=8e-301) | ABC transporter family protein
Coordinates
chrA07:+:15647129..15653779
Molecular Weight (calculated)
71863.0 Da
IEP (calculated)
8.585
GRAVY (calculated)
0.199
Length
650 amino acids
Sequence
(BLAST)
001: MSGFDGVENQ INVPDITACL PQDPREPRSL LPITLKFVDV CYRVKLHGDS SKIKKLLGLE HKPSDETRTT ERTILSGVTG MVSPGEFMAV LGPSGSGKST
101: LLNAVAGRLH GPGLTGNILA NDAKPTKQTL KRTGFVDQDD LLYPHLTVRE TLIFVALLRL PRSLTREDKI KAAESVISEL GLEKCENTVV GNTFIRGISG
201: GERKRVSIAH EVLINPSLLV LDEPTSGLDA TAALRLVQTL AGMAHGKGKT VVTSIHQPSS RAFQMFDTVL LLSEGRCLFY GKGRDAMAYF DSVGFSPAFP
301: MNPADFLLDP ANGVCQIDAA TEREKPNVRQ TLAVAYDTLL APNVKTYIDA TPSRENVRFL KTETNVRGIM SGFTTWFSQL CILLHRLIKE RRHESFDALR
401: VFQVVAASLL AGLMWWHSDF RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVIGSLS MELVLPAAFL TLTYWMVGLR
501: PGLVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGFYVNKVP SGMVWMKYVS TTFYCYRLMI AVQYGNGEEI LGMFGCELKR
601: TEGAARTDGC RFMEEEVVGD IELWTSVTVL FFMFVGYRML AYLALRRIKL
Best Arabidopsis Sequence Match ( AT1G71960.1 )
(BLAST)
001: MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL
101: GPSGSGKSTL LNAVAGRLHG SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR AAESVISELG LTKCENTVVG
201: NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE
301: SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE
401: RRHESFDLLR IFQVVAASIL CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY FMAHVLGSLS MELVLPASFL
501: TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI
601: LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI KH
Arabidopsis Description
ABCG25ABC transporter G family member 25 [Source:UniProtKB/Swiss-Prot;Acc:Q84TH5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.