Factsheet for Bra008817.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69629	Canola	plastid	98.9	98.63
CDY09810	Canola	plastid	98.48	95.08
AT5G13580.1	Thale cress	cytosol, peroxisome, plasma membrane	91.46	91.33
Bra005049.1-P	Field mustard	plasma membrane	33.75	82.49
Bra005051.1-P	Field mustard	plastid	66.94	79.15
PGSC0003DMT400060438	Potato	cytosol, peroxisome, plasma membrane, plastid	74.79	75.0
VIT_13s0067g03750.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.31	74.16
Solyc05g054890.2.1	Tomato	cytosol	75.48	73.07
KRG92984	Soybean	cytosol, peroxisome, plasma membrane	75.21	72.8
Bra005048.1-P	Field mustard	cytosol, nucleus, plasma membrane	73.83	72.04
PGSC0003DMT400029838	Potato	extracellular	68.18	71.22
Solyc04g010200.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.39	71.17
PGSC0003DMT400029881	Potato	cytosol, peroxisome, plasma membrane	70.94	71.13
Solyc04g010210.1.1	Tomato	extracellular	68.73	69.89
Bra017193.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.59	67.12
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	63.64	65.44
GSMUA_Achr5P28450_001	Banana	plasma membrane	62.4	64.9
Bra007141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.81	64.41
Bra003208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.71	63.37
Bra014775.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.19	62.52
HORVU5Hr1G021120.1	Barley	cytosol, peroxisome, plasma membrane	58.54	62.41
Os05t0120200-01	Rice	plasma membrane	60.06	62.37
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	67.77	62.28
Bra014773.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.88	62.25
TraesCS5D01G093600.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	58.26	62.11
TraesCS5A01G078500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.99	61.82
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	63.22	61.78
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	67.63	61.68
TraesCS5B01G087400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	57.85	61.67
Os05t0120000-00	Rice	plasma membrane	57.58	61.47
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	62.95	61.34
TraesCS1B01G066000.1	Wheat	cytosol, peroxisome, plasma membrane	58.54	61.24
TraesCS4B01G200600.1	Wheat	cytosol, peroxisome, plasma membrane	66.67	61.11
Bra035353.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.06	60.98
TraesCS4A01G103400.1	Wheat	cytosol, peroxisome, plasma membrane	66.8	60.93
TraesCS1D01G052000.1	Wheat	cytosol, peroxisome, plasma membrane	57.99	60.84
Zm00001d035553_P001	Maize	plasma membrane	59.78	60.78
HORVU3Hr1G087130.1	Barley	plasma membrane, plastid	63.36	60.77
HORVU0Hr1G007130.1	Barley	plasma membrane, plastid	63.36	60.77
TraesCS1A01G049600.2	Wheat	cytosol, peroxisome, plasma membrane	58.4	60.57
TraesCS3B01G387500.1	Wheat	plastid	63.09	60.5
TraesCS3A01G354500.1	Wheat	plasma membrane, plastid	62.95	60.45
TraesCS3D01G348400.1	Wheat	plasma membrane, plastid	62.95	60.45
HORVU3Hr1G007180.1	Barley	cytosol, peroxisome, plasma membrane	55.51	60.33
EES17614	Sorghum	cytosol, peroxisome, vacuole	58.95	60.28
Os03t0281900-01	Rice	cytosol, plasma membrane	65.15	60.1
Os01t0836600-01	Rice	plasma membrane	61.98	60.08
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	58.82	59.97
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	58.95	59.94
Zm00001d042953_P001	Maize	plasma membrane	62.67	59.79
TraesCS3B01G047600.1	Wheat	cytosol, peroxisome, vacuole	54.55	58.67
TraesCS3A01G036400.1	Wheat	cytosol, peroxisome, vacuole	54.27	58.37
TraesCS4D01G201700.1	Wheat	mitochondrion, plasma membrane, plastid	66.53	57.43
HORVU1Hr1G009920.2	Barley	plasma membrane, plastid	58.26	53.61
Bra007006.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.32	52.43
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	63.22	51.06
Bra014774.1-P	Field mustard	plasma membrane	41.46	47.55
HORVU4Hr1G058160.2	Barley	cytosol, peroxisome	42.15	46.65
HORVU4Hr1G058070.2	Barley	cytosol	51.24	45.64
HORVU5Hr1G021110.1	Barley	cytosol	25.34	42.89
Bra014776.1-P	Field mustard	cytosol	72.73	41.12
Bra030948.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.34	36.22
Os03t0282100-00	Rice	cytosol, nucleus, plastid	37.88	35.9
Bra002234.1-P	Field mustard	cytosol	23.42	35.42
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.58	35.13
GSMUA_Achr6P08820_001	Banana	plasma membrane	57.02	33.5
Bra022614.1-P	Field mustard	plastid	27.14	33.45
Bra013916.1-P	Field mustard	plastid	26.31	33.33
Bra003903.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.45	29.54
Bra019051.1-P	Field mustard	plasma membrane	25.9	29.51
Bra016095.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.86	29.5
Bra007999.1-P	Field mustard	plasma membrane	26.45	29.14
Bra026352.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.34	28.84
Bra026514.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.03	28.29
Bra033878.1-P	Field mustard	cytosol, peroxisome, plastid	24.79	28.08
Bra025152.1-P	Field mustard	plastid	19.15	28.08
Bra009203.1-P	Field mustard	plasma membrane	26.72	25.7
Bra039378.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.97	25.55
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.31	25.4
Bra023202.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.21	25.17
Bra014326.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.73	22.39
Bra033441.1-P	Field mustard	plastid	26.45	16.96

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra008817	EnsemblPlants:Bra008817.1	EnsemblPlants:Bra008817.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009624	GO:GO:0009987	GO:GO:0010345	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0019748	InterPro:IPR003439	UniProt:M4CX70
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241
PANTHER:PTHR19241:SF428	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000254378B	SEG:seg

Description

AT5G13580 (E=0.0) | ABC transporter family protein

Coordinates

chrA10:-:13968460..13970640

Molecular Weight (calculated)

80276.7 Da

IEP (calculated)

10.008

GRAVY (calculated)

0.172

Length

726 amino acids

Sequence
(BLAST)

001: MSRVVATDDN MSLPFFSPEP NHLSTFSTAS SSPTFAQLLK NVGDTTTVEL NDQHHVDMNL ASPNQSVPFH LSFNDLTYSV KVRRKFTWKR APSADPIVGE
101: SPLSSKTKTL LNGISGEARD GEILAVLGAS GSGKSTLIDA LANRIAKGSL KGNVTLNGEV LNSKMQKAIS AYVMQDDLLF PMLTVEETLM FAAEFRLPRS
201: LSKSKKSLRV QALIDQLGLR NAAKTIIGDE GHRGISGGER RRVSIGIDII HDPILLFLDE PTSGLDSTSA LSVVKVLKRI AQSGSMVIMT LHQPSYRLLR
301: LLDRLLFLSR GQTVFSGSPA MLPSFFAEFG HPIPERENRT EFALDLIREL EGSAGGTRSL VEFNKEFRQR KAEPRTQTGL SLKEAISASI SKGKLVSGAT
401: SGSGSSPVST IPTFANPFWV ELLVLAKRSM TNYRRQPELF GIRLGAVLVT GFILATMFWQ LDNSPKGVQE RLGFFAFAMS TTFYTCADAL PVFLQERFIF
501: MRETAYNAYR RSSYVLSHSL VALPSLIILS LAFAATTFWA VGLDGGLMGF LFYFLIVLAA FWAGSSFVTF LSGVVPHVML GYTIVVAILA YFLLFSGFFI
601: TRDRIPAYWI WFHYISLVKY PYEAVLINEF GDPTKCFIRG VQIFDNTPLA AVPQGMKVKL LSTMSKSLGM RITSSTCLTT GYDILQQQGV TDLSKWNCLW
701: ITVACGFFFR ILFYFSLLLG SKNKRR

Best Arabidopsis Sequence Match ( AT5G13580.1 )
(BLAST)

001: MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI
101: FSSKTKTLLN GITGEARDGE ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM LTVEETLMFA AEFRLPRSLS
201: KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL
301: DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT
401: THSSGSSPVS TIPTFANPFW VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM STTFYTCADA LPVFLQERFI
501: FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF
601: INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL
701: WVTVAWGFFF RILFYFSLLL GSKNKRR

Arabidopsis Description

ABCG6ABC transporter G family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB5]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.