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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 91.32 90.37
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 91.17 90.22
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 79.34 77.83
Os05t0120000-00 Rice plasma membrane 74.4 73.09
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 77.99 66.03
Bra005049.1-P Field mustard plasma membrane 27.99 62.96
CDY44641 Canola plasma membrane 27.99 62.96
Bra005051.1-P Field mustard plastid 55.99 60.91
CDX74853 Canola plastid 55.99 60.62
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 61.08 56.35
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 63.32 55.88
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 63.32 55.88
Bra008817.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 60.33 55.51
KRH67592 Soybean plastid 60.93 55.45
PGSC0003DMT400029838 Potato extracellular 57.63 55.4
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 60.18 55.3
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 54.79 55.29
HORVU5Hr1G021110.1 Barley cytosol 35.48 55.24
CDX69629 Canola plastid 60.18 55.22
CDY02907 Canola cytosol, peroxisome, plasma membrane 52.4 55.12
KRG95875 Soybean cytosol, peroxisome, plasma membrane 60.63 55.03
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 60.63 55.03
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 59.13 55.01
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 59.58 54.97
VIT_08s0040g02840.t01 Wine grape cytosol, peroxisome, plasma membrane 60.48 54.89
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 61.08 54.62
Solyc05g054890.2.1 Tomato cytosol 60.93 54.27
Solyc04g010210.1.1 Tomato extracellular 57.93 54.2
AT2G39350.1 Thale cress cytosol 60.03 54.19
KRG92984 Soybean cytosol, peroxisome, plasma membrane 60.63 54.0
AT3G53510.1 Thale cress plasma membrane 59.73 53.99
Bra005048.1-P Field mustard cytosol, nucleus, plasma membrane 59.88 53.76
Solyc09g005970.1.1 Tomato plasma membrane 59.28 53.66
CDX93388 Canola plasma membrane 59.43 53.58
CDX76119 Canola cytosol, peroxisome, plasma membrane 53.44 53.52
CDY09810 Canola plastid 60.18 53.46
Bra017193.1-P Field mustard cytosol, peroxisome, plasma membrane 59.28 53.37
PGSC0003DMT400061466 Potato plasma membrane 59.13 53.31
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 56.44 53.25
CDY18451 Canola cytosol, peroxisome, plasma membrane 59.13 53.23
CDX76121 Canola cytosol 37.43 53.08
CDY40201 Canola cytosol 55.24 52.12
Bra014773.1-P Field mustard cytosol, peroxisome, plasma membrane 55.39 52.11
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 58.83 52.05
Bra007141.1-P Field mustard cytosol, peroxisome, plasma membrane 55.09 51.98
Bra014775.1-P Field mustard cytosol, peroxisome, plasma membrane 54.34 51.93
CDX73549 Canola cytosol, peroxisome, plasma membrane 58.68 51.85
CDX67624 Canola cytosol, peroxisome, plasma membrane 54.79 51.77
Bra003208.1-P Field mustard cytosol, peroxisome, plasma membrane 54.79 51.77
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 55.69 51.31
CDY65003 Canola cytosol, peroxisome, plasma membrane 54.49 50.98
CDY37656 Canola cytosol, peroxisome, plasma membrane 54.19 50.77
Bra035353.1-P Field mustard cytosol, peroxisome, plasma membrane 54.19 50.63
CDX73404 Canola plasma membrane 55.54 47.02
CDY50899 Canola cytosol 21.11 42.34
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 41.32 42.07
Bra007006.1-P Field mustard cytosol, peroxisome, plasma membrane 59.13 41.75
Bra014774.1-P Field mustard plasma membrane 38.32 40.44
HORVU4Hr1G058070.2 Barley cytosol 45.06 36.93
HORVU3Hr1G054160.1 Barley plastid 33.38 36.68
HORVU5Hr1G060690.4 Barley mitochondrion 39.52 36.41
HORVU1Hr1G056890.2 Barley cytosol 33.23 33.89
HORVU7Hr1G081250.1 Barley mitochondrion 31.44 31.82
CDX76122 Canola plasma membrane 60.63 31.59
Bra014776.1-P Field mustard cytosol 60.63 31.54
CDY02906 Canola plasma membrane 60.48 31.44
HORVU2Hr1G124860.3 Barley nucleus, peroxisome, plastid 24.7 29.78
HORVU3Hr1G005770.1 Barley endoplasmic reticulum 16.62 29.06
HORVU4Hr1G018800.7 Barley plastid 26.95 28.04
HORVU7Hr1G014870.1 Barley cytosol, peroxisome, plasma membrane 28.59 27.88
HORVU4Hr1G072620.1 Barley plastid 28.89 25.5
HORVU3Hr1G066220.1 Barley plastid 27.4 22.96
HORVU7Hr1G090350.4 Barley cytosol, nucleus, plasma membrane 24.85 22.68
HORVU3Hr1G005830.3 Barley cytosol 9.88 17.46
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-likeInterPro:ABC_transporter_CS
EMBL:AK365639UniProt:F2DP21GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
EnsemblPlantsGene:HORVU3Hr1G007180EnsemblPlants:HORVU3Hr1G007180.1InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF294SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0002006C23SEG:seg:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DP21]
Coordinates
chrchr3H:+:17397970..17400387
Molecular Weight (calculated)
71948.7 Da
IEP (calculated)
9.624
GRAVY (calculated)
0.302
Length
668 amino acids
Sequence
(BLAST)
001: MATSGHMVVG VGGPDEPEPV PYVLSFTDLC YSVSSNSRRG RNQIANTDSK ALLDGISGEA RDGELFAVMG ASGAGKSTLL DALAGRITRG SLRGGVTLNG
101: EPLGGGRLRA ISAYVMQDDL LYPMLTVRET LLFAAEFRLP RALSAARKRD RVDALIRQLG LSGAADTVVG DETHRGVSGG ERRRVSIGAD IIHDPILLFL
201: DEPTSGLDST SAFMVVQVLR DIARSGSVVV MTIHQPSARI LGILGRLLLL SRGRTVYSGT PAGLKPFFSE LGTPIPDNEN PAEFALDTIR DLERQPDGTA
301: KLADFNASWH GHVDTTSKKV SRTVMPLELA VSESVSRGKL GRLSGGGGGK GGMPTYANPL ALEVWVLTKR SFINFRRMPE LFVLRLGTLM VTGIVLATIF
401: FHLDDTPKGV QERLGFFAMG MSTMFYVSAG TLPVFIQERH VYLRETEHNA YRRISYVLAS TAVFFPPLVI LCLAFAVTTF FAVGLAGGGA SFGFFALTIL
501: ASLWAGSGFV TFLSAVVPHV VLGYTVVVAV LAYFLLLSGF FISRDRIPSY WMWLHYMSLV KYPYQALVQN EFGDATRCFA RGIQVFDGTL VGGMSEAVKM
601: KVLGAISATL GANVTASTCL LTGADVLKQQ AVTDLGKWSC LLVTAAFGVF FRALFYVVLL VGSKNKRR
Best Arabidopsis Sequence Match ( AT2G37360.1 )
(BLAST)
001: MSGLLGKSSP AKRVDGNNDL PMYYVNPMSV EPQGRPSDTT RVSVTFAEHL MNVEDARNDE SASSRALGIA SPINSAASSF NSWASAPASS ISSSPFVLSF
101: TDLTYSVKIQ KKFNPLACCR RSGNDSSVNT KILLNGISGE AREGEMMAVL GASGSGKSTL IDALANRIAK DSLRGSITLN GEVLESSMQK VISAYVMQDD
201: LLFPMLTVEE TLMFSAEFRL PRSLSKKKKK ARVQALIDQL GLRSAAKTVI GDEGHRGVSG GERRRVSIGN DIIHDPIILF LDEPTSGLDS TSAYMVIKVL
301: QRIAQSGSIV IMSIHQPSYR IMGLLDQLIF LSKGNTVYSG SPTHLPQFFS EFKHPIPENE NKTEFALDLI RELEYSTEGT KPLVEFHKQW RAKQAPSYNN
401: NNKRNTNVSS LKEAITASIS RGKLVSGATN NNSSNLTPSF QTFANPFWIE MIVIGKRAIL NSRRQPELLG MRLGAVMVTG IILATMFTNL DNSPKGAQER
501: LGFFAFAMST TFYTCAEAIP VFLQERYIFM RETAYNAYRR SSYVLSQSII SIPALIVLSA SFAATTFWAV GLDGGANGFF FFYFTILASF WAGSSFVTFL
601: SGVIPNVMLG FTVVVAILAY FLLFSGFFIS RDRIPVYWLW FHYISLVKYP YEGVLQNEFQ NPTRCFARGV QLFDNSPLGE FPNDVKVNLL KSMSGVLGTN
701: VTAETCVTTG IDILKQQGIT DISKWNCLWI TVAWGFFFRV LFYFTLLIGS KNKRK
Arabidopsis Description
ABCG2ABCG2 [Source:UniProtKB/TrEMBL;Acc:A0A178VW33]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.