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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G39350.1 Thale cress cytosol 84.51 84.05
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 73.23 74.14
PGSC0003DMT400060438 Potato cytosol, peroxisome, plasma membrane, plastid 71.2 72.38
Solyc05g054890.2.1 Tomato cytosol 72.01 70.67
PGSC0003DMT400029838 Potato extracellular 66.71 70.65
VIT_13s0067g03750.t01 Wine grape cytosol, peroxisome, plasma membrane 71.6 70.55
KRG92984 Soybean cytosol, peroxisome, plasma membrane 71.88 70.53
PGSC0003DMT400029881 Potato cytosol, peroxisome, plasma membrane 69.02 70.17
Solyc04g010200.1.1 Tomato cytosol, peroxisome, plasma membrane 68.21 69.92
Solyc04g010210.1.1 Tomato extracellular 67.12 69.19
GSMUA_Achr8P02140_001 Banana cytosol, peroxisome, plasma membrane 63.59 66.29
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 62.64 65.11
AT3G53510.1 Thale cress plasma membrane 65.22 64.95
GSMUA_Achr5P28450_001 Banana plasma membrane 61.14 64.47
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 57.74 64.2
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 65.62 63.97
Zm00001d028689_P001 Maize cytosol, peroxisome, plasma membrane 67.93 63.29
EER95064 Sorghum cytosol, peroxisome, plasma membrane 67.93 62.81
Zm00001d012438_P001 Maize cytosol, peroxisome, plasma membrane, plastid 63.32 62.72
Os05t0120200-01 Rice plasma membrane 59.51 62.66
EES01718 Sorghum cytosol, peroxisome, plasma membrane, plastid 63.32 62.55
HORVU5Hr1G021120.1 Barley cytosol, peroxisome, plasma membrane 57.61 62.26
Os05t0120000-00 Rice plasma membrane 57.2 61.91
HORVU3Hr1G087130.1 Barley plasma membrane, plastid 63.59 61.82
HORVU0Hr1G007130.1 Barley plasma membrane, plastid 63.59 61.82
TraesCS5A01G078500.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.2 61.82
TraesCS5B01G087400.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.2 61.82
TraesCS5D01G093600.1 Wheat cytosol, peroxisome, plasma membrane, plastid 57.2 61.82
EES18923 Sorghum cytosol, peroxisome, plasma membrane 59.92 61.76
TraesCS3D01G348400.1 Wheat plasma membrane, plastid 63.32 61.64
TraesCS3A01G354500.1 Wheat plasma membrane, plastid 63.32 61.64
Zm00001d042953_P001 Maize plasma membrane 63.72 61.63
Zm00001d035553_P001 Maize plasma membrane 59.78 61.62
TraesCS4B01G200600.1 Wheat cytosol, peroxisome, plasma membrane 66.3 61.62
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 60.6 61.52
TraesCS4A01G103400.1 Wheat cytosol, peroxisome, plasma membrane 66.44 61.43
TraesCS3B01G387500.1 Wheat plastid 63.18 61.43
TraesCS1B01G066000.1 Wheat cytosol, peroxisome, plasma membrane 57.74 61.24
Os01t0836600-01 Rice plasma membrane 61.96 60.88
TraesCS1D01G052000.1 Wheat cytosol, peroxisome, plasma membrane 57.2 60.84
Zm00001d011006_P001 Maize cytosol, peroxisome, vacuole 58.83 60.81
HORVU3Hr1G007180.1 Barley cytosol, peroxisome, plasma membrane 55.03 60.63
TraesCS1A01G049600.2 Wheat cytosol, peroxisome, plasma membrane 57.61 60.57
Os03t0281900-01 Rice cytosol, plasma membrane 64.4 60.23
EES17614 Sorghum cytosol, peroxisome, vacuole 57.74 59.86
TraesCS4D01G201700.1 Wheat mitochondrion, plasma membrane, plastid 66.44 58.15
TraesCS3B01G047600.1 Wheat cytosol, peroxisome, vacuole 52.99 57.78
TraesCS3A01G036400.1 Wheat cytosol, peroxisome, vacuole 52.72 57.48
HORVU1Hr1G009920.2 Barley plasma membrane, plastid 57.61 53.74
GSMUA_Achr6P33280_001 Banana cytosol, peroxisome, plasma membrane 61.96 50.72
CDY02906 Canola plasma membrane 86.68 49.65
CDX76122 Canola plasma membrane 86.41 49.61
Bra014776.1-P Field mustard cytosol 86.41 49.53
HORVU4Hr1G058160.2 Barley cytosol, peroxisome 41.44 46.49
HORVU4Hr1G058070.2 Barley cytosol 51.36 46.38
HORVU5Hr1G021110.1 Barley cytosol 24.18 41.49
Os03t0282100-00 Rice cytosol, nucleus, plastid 37.23 35.77
AT1G53270.1 Thale cress plasma membrane 28.53 35.59
AT4G25750.1 Thale cress plasma membrane 27.04 34.49
AT5G52860.1 Thale cress cytosol, nucleus, plasma membrane, plastid 27.45 34.3
AT2G13610.1 Thale cress cytosol, peroxisome, plasma membrane 30.03 34.05
GSMUA_Achr6P08820_001 Banana plasma membrane 56.79 33.82
AT5G19410.2 Thale cress plastid 28.4 33.02
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 25.41 28.25
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 24.32 28.06
AT1G31770.1 Thale cress cytosol, nucleus, peroxisome 23.37 26.54
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 24.32 26.13
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 23.78 26.04
AT5G06530.1 Thale cress plasma membrane 25.95 25.43
AT2G01320.3 Thale cress peroxisome, plastid, vacuole 22.96 23.21
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:824675InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSProteinID:AEE79339.1ArrayExpress:AT3G55090EnsemblPlantsGene:AT3G55090RefSeq:AT3G55090TAIR:AT3G55090
RefSeq:AT3G55090-TAIR-GEnsemblPlants:AT3G55090.1TAIR:AT3G55090.1EMBL:BX819631ProteinID:CAB82704.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0007275GO:GO:0008150
GO:GO:0009653GO:GO:0009987GO:GO:0010208GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439RefSeq:NP_191069.2
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PO:PO:0000293PO:PO:0007611PO:PO:0007616
PO:PO:0009005PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009046ScanProsite:PS00211
PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF428UniProt:Q9M2V7SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0001739329SEG:seg:::
Description
ABCG16ABC transporter G family member 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2V7]
Coordinates
chr3:-:20416183..20418910
Molecular Weight (calculated)
81708.5 Da
IEP (calculated)
9.588
GRAVY (calculated)
0.148
Length
736 amino acids
Sequence
(BLAST)
001: MSRILVEDDN ATPFHSMEII SSSLTLGQLL KNVSDVRKVE VGDETPVHEF FDRDGSSLDG DNDHLMRPVP FVLSFNNLTY NVSVRRKLDF HDLVPWRRTS
101: FSKTKTLLDN ISGETRDGEI LAVLGASGSG KSTLIDALAN RIAKGSLKGT VTLNGEALQS RMLKVISAYV MQDDLLFPML TVEETLMFAA EFRLPRSLPK
201: SKKKLRVQAL IDQLGIRNAA KTIIGDEGHR GISGGERRRV SIGIDIIHDP IVLFLDEPTS GLDSTSAFMV VKVLKRIAES GSIIIMSIHQ PSHRVLSLLD
301: RLIFLSRGHT VFSGSPASLP SFFAGFGNPI PENENQTEFA LDLIRELEGS AGGTRGLVEF NKKWQEMKKQ SNPQTLTPPA SPNPNLTLKE AISASISRGK
401: LVSGGGGGSS VINHGGGTLA VPAFANPFWI EIKTLTRRSI LNSRRQPELL GMRLATVIVT GFILATVFWR LDNSPKGVQE RLGFFAFAMS TMFYTCADAL
501: PVFLQERYIF MRETAYNAYR RSSYVLSHAI VTFPSLIFLS LAFAVTTFWA VGLEGGLMGF LFYCLIILAS FWSGSSFVTF LSGVVPHVML GYTIVVAILA
601: YFLLFSGFFI NRDRIPQYWI WFHYLSLVKY PYEAVLQNEF SDPTECFVRG VQLFDNSPLG ELTYGMKLRL LDSVSRSIGM RISSSTCLTT GADVLKQQGV
701: TQLSKWNCLL ITVGFGFLFR ILFYLCLLLG SKNKRR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.