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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 4
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89396 Canola plasma membrane 87.0 87.61
CDX94418 Canola plastid 86.66 87.26
Bra013916.1-P Field mustard plastid 86.66 87.26
AT5G52860.1 Thale cress cytosol, nucleus, plasma membrane, plastid 81.28 79.63
KRH35226 Soybean cytosol, mitochondrion, plasma membrane 58.41 71.7
VIT_16s0050g01620.t01 Wine grape cytosol 71.92 69.51
Solyc03g007690.1.1 Tomato plastid 67.76 65.49
KRG91599 Soybean cytosol, plastid 64.64 65.32
PGSC0003DMT400053843 Potato cytosol, plasma membrane, plastid 67.24 65.1
GSMUA_Achr7P10690_001 Banana cytosol 47.49 58.8
GSMUA_Achr6P05760_001 Banana cytosol, nucleus, plastid 55.81 57.6
Os06t0503100-01 Rice cytosol, peroxisome, plasma membrane 45.41 53.91
Zm00001d044895_P001 Maize cytosol, peroxisome, plasma membrane 55.81 52.1
EES14035 Sorghum cytosol, peroxisome, plasma membrane 55.29 50.47
HORVU7Hr1G081250.1 Barley mitochondrion 55.63 48.64
TraesCS7A01G342000.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane, plastid 55.46 48.34
TraesCS7D01G337600.1 Wheat cytosol, peroxisome, plasma membrane 55.46 48.34
TraesCS7B01G240900.1 Wheat cytosol, peroxisome, plasma membrane 54.94 47.89
AT1G53270.1 Thale cress plasma membrane 41.25 40.34
AT5G19410.2 Thale cress plastid 42.46 38.7
AT2G13610.1 Thale cress cytosol, peroxisome, plasma membrane 42.29 37.6
AT3G55100.1 Thale cress cytosol, peroxisome, plasma membrane 33.62 29.31
AT3G55110.1 Thale cress cytosol, peroxisome, plasma membrane 34.49 28.11
AT3G55090.1 Thale cress cytosol, peroxisome, plasma membrane 34.49 27.04
AT2G39350.1 Thale cress cytosol 34.14 26.62
AT3G55130.1 Thale cress mitochondrion, peroxisome, plasma membrane 33.1 26.34
AT5G13580.1 Thale cress cytosol, peroxisome, plasma membrane 33.1 26.27
AT3G53510.1 Thale cress plasma membrane 33.28 25.98
AT2G37360.1 Thale cress cytosol, peroxisome, plasma membrane 32.24 24.64
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 26.86 23.07
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 25.3 22.88
AT1G31770.1 Thale cress cytosol, nucleus, peroxisome 25.65 22.84
AT1G71960.1 Thale cress cytosol, peroxisome, plasma membrane 26.17 22.81
AT3G13220.1 Thale cress cytosol, peroxisome, plasma membrane 25.13 21.17
AT2G01320.3 Thale cress peroxisome, plastid, vacuole 24.78 19.64
AT5G06530.1 Thale cress plasma membrane 25.13 19.31
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300EntrezGene:828680InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSProteinID:AEE85109.1ArrayExpress:AT4G25750EnsemblPlantsGene:AT4G25750RefSeq:AT4G25750TAIR:AT4G25750
RefSeq:AT4G25750-TAIR-GEnsemblPlants:AT4G25750.1TAIR:AT4G25750.1ProteinID:CAB39596.1ProteinID:CAB81385.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439RefSeq:NP_194305.1
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061PO:PO:0000037PO:PO:0000293PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007611PO:PO:0007616PO:PO:0009009
PO:PO:0009010PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0025022
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF290UniProt:Q9SW08SMART:SM00382
SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI00000A45FBSEG:seg::
Description
ABCG4ABC transporter G family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW08]
Coordinates
chr4:-:13110466..13112482
Molecular Weight (calculated)
64693.7 Da
IEP (calculated)
9.683
GRAVY (calculated)
0.423
Length
577 amino acids
Sequence
(BLAST)
001: MESYTLSTSS ISYAKPLSPL LLTAEQPSFI LRNITLTSHP SQILAIIGPS GAGKSTLLDI LAARTSPTSG SILLNSVLIN PSSYRKISSY VPQHDTFFPL
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.