Factsheet for GSMUA_Achr6P05760_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10690_001	Banana	cytosol	71.56	85.84
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	67.08	60.68
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	67.98	60.13
VIT_16s0050g01620.t01	Wine grape	cytosol	63.86	59.8
Solyc03g007690.1.1	Tomato	plastid	63.33	59.3
PGSC0003DMT400053843	Potato	cytosol, plasma membrane, plastid	63.15	59.23
Os06t0503100-01	Rice	cytosol, peroxisome, plasma membrane	51.34	59.05
Bra013916.1-P	Field mustard	plastid	58.68	57.24
CDX94418	Canola	plastid	58.68	57.24
CDX89396	Canola	plasma membrane	58.5	57.07
TraesCS7A01G342000.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	66.55	56.19
KRH35226	Soybean	cytosol, mitochondrion, plasma membrane	47.05	55.96
AT4G25750.1	Thale cress	plasma membrane	57.6	55.81
HORVU7Hr1G081250.1	Barley	mitochondrion	65.83	55.76
TraesCS7D01G337600.1	Wheat	cytosol, peroxisome, plasma membrane	65.83	55.59
TraesCS7B01G240900.1	Wheat	cytosol, peroxisome, plasma membrane	65.47	55.29
AT5G52860.1	Thale cress	cytosol, nucleus, plasma membrane, plastid	57.96	55.01
Bra022614.1-P	Field mustard	plastid	57.78	54.84
CDY27043	Canola	plastid	57.78	54.84
CDX96159	Canola	plastid	57.6	54.67
KRG91599	Soybean	cytosol, plastid	55.81	54.64
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	40.07	43.16
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	44.54	42.56
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	29.52	39.86
GSMUA_Achr9P00310_001	Banana	cytosol	36.31	39.27
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	31.84	28.03
GSMUA_Achr5P28450_001	Banana	plasma membrane	33.09	26.5
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	30.23	26.2
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	32.92	26.06
GSMUA_Achr2P04580_001	Banana	plasma membrane	27.73	25.88
GSMUA_Achr1P26960_001	Banana	cytosol	11.09	24.7
GSMUA_Achr8P34440_001	Banana	plasma membrane	24.87	24.43
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	27.91	24.19
GSMUA_Achr11P...	Banana	plasma membrane	26.12	24.09
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	26.48	24.07
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	28.09	23.16
GSMUA_Achr2P02720_001	Banana	mitochondrion	22.9	21.51
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	28.44	21.34
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	27.55	20.7
GSMUA_Achr6P23160_001	Banana	plastid	26.65	20.27
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	32.38	20.13
GSMUA_Achr10P...	Banana	plasma membrane	23.97	20.0
GSMUA_Achr1P26950_001	Banana	plasma membrane	6.98	19.7
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.04	19.58
GSMUA_Achr6P08820_001	Banana	plasma membrane	32.74	14.81
GSMUA_Achr1P19280_001	Banana	plasma membrane	24.87	13.08

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr6G05760_001	EnsemblPlants:GSMUA_Achr6P05760_001
EnsemblPlants:GSMUA_Achr6T05760_001	InterPro:IPR003439	UniProt:M0T4H4	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF290	SMART:SM00382	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000295B965	SEG:seg	:	:	:

Description

ABC transporter G family member 8 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05760_001]

Coordinates

chr6:+:3876228..3878048

Molecular Weight (calculated)

61439.9 Da

IEP (calculated)

9.021

GRAVY (calculated)

0.321

Length

559 amino acids

Sequence
(BLAST)

001: MAEQHSSPPP PSPPPPPQEM KTKTYELAAH SIFYAKPAAV HPLKLLLHPC RPSPPPHYIL CDVSLTARPG EILAIVGPSG AGKSTLLDVL AARTAPTAGY
101: VRLNSSPLHP ASFRRLSAHV PQHDASLPLL TVFETFAFAA RLLHRCHASA IIASLLADLR LSRVAHTRLS GNLSGGERRR VSIGLSLLRD PSVLLLDEPT
201: SGLDSLSAHL VLQSLRSVAA SRCTTVVLSI HQPSSRLLSS IDSLLLLSNG SVIHHGSLSS LDRFLLSSGF SAPSQINPLE FAMELKESKI EGEEELSVHY
301: SSSRVREIVT LYGRCWKLVY RTKQLLLANT LEALIVGFLL GTIYMNVSFD DEGMAKRLGL FAFTLTFLLS TTTETLPIFV EERPILLRET SSGLYRLSSH
401: LIAGTLVFVP YLLAISLLYS VSVYFLTGLC ASWSALANFV LIVWALVLTA NSFVLFISSL APDYIAGTSL VTVSLAGFFL FSGYFIAKEN MPEYWAFAHY
501: LSPFKYGLDA LLANEDVLER RGLKEGEGWA NLQVLWGFFV FYRLLYWIVL RRRASASKK

Best Arabidopsis Sequence Match ( AT4G25750.1 )
(BLAST)

001: MESYTLSTSS ISYAKPLSPL LLTAEQPSFI LRNITLTSHP SQILAIIGPS GAGKSTLLDI LAARTSPTSG SILLNSVLIN PSSYRKISSY VPQHDTFFPL
101: LTVSETFTFS ASLLLPKNLS KVSSVVASLL KELNLTHLAH TRLGQGLSGG ERRRVSIGLS LLHDPEVLLL DEPTSGLDSK SAFDVVQILK SIATSRERIV
201: ILSIHQPSFK ILSLIDRVLL LSKGTIVYHG RLDLLEAFLL SKGFTVPSQL NSLEYAMEIL QNIRDPYENA NIALPDHCPE SKKQNQKQSI VRYKSSRITE
301: ISLLSSRFWK IIYRTRQLLL TNILESLVVG LVLGTIYLNI GTGKEGIRKR FGLFAFTLTF LLSSTTQTLP IFIDERPILL RETSSGLYRL SSHILANTLV
401: FLPYLLLIAI IYSVSLYFLV GLCFSWQALA YFVLVIWIIV LMANSFVLFL SSLAPNYIAG TSSVTILLAA FFLFSGYFIS KESLPKYWLF MYFFSMYKYA
501: LDALLINEYS CLHNKCLVWF EEASVNSCLV TGGDVLDKNG LHERQRWFNV YMLLGFFVLY RVLCFLVLLK RVSGSKR

Arabidopsis Description

ABCG4ABC transporter G family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW08]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.