Factsheet for GSMUA_Achr8P34440_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P26950_001	Banana	plasma membrane	21.27	61.11
GSMUA_Achr1P26960_001	Banana	cytosol	25.31	57.37
Solyc04g070970.2.1	Tomato	cytosol, peroxisome, plasma membrane	67.84	53.46
VIT_18s0166g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.18	52.19
PGSC0003DMT400002062	Potato	cytosol	68.37	51.18
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	66.26	50.67
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	62.21	49.51
GSMUA_Achr6P23160_001	Banana	plastid	63.62	49.25
GSMUA_Achr1P08870_001	Banana	cytosol, peroxisome, plasma membrane	45.87	42.44
GSMUA_Achr2P02720_001	Banana	mitochondrion	43.59	41.68
GSMUA_Achr2P04580_001	Banana	plasma membrane	42.35	40.23
GSMUA_Achr11P...	Banana	plasma membrane	41.3	38.78
GSMUA_Achr6P25480_001	Banana	cytosol, peroxisome, plastid	43.59	38.45
GSMUA_Achr1P10650_001	Banana	cytosol, peroxisome, plasma membrane	45.52	34.77
GSMUA_Achr9P08630_001	Banana	cytosol, peroxisome, plasma membrane	40.95	34.37
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	26.89	29.48
GSMUA_Achr9P00310_001	Banana	cytosol	26.01	28.63
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, peroxisome, plasma membrane	19.33	26.57
GSMUA_Achr7P10690_001	Banana	cytosol	20.56	25.11
GSMUA_Achr6P05760_001	Banana	cytosol, nucleus, plastid	24.43	24.87
GSMUA_Achr2P06780_001	Banana	cytosol, peroxisome, plasma membrane, plastid	25.48	24.79
GSMUA_Achr9P27200_001	Banana	cytosol, peroxisome, plasma membrane	26.71	23.57
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	25.83	23.15
GSMUA_Achr10P...	Banana	plasma membrane	27.24	23.13
GSMUA_Achr1P19280_001	Banana	plasma membrane	41.48	22.2
GSMUA_Achr5P28450_001	Banana	plasma membrane	27.07	22.06
GSMUA_Achr8P02140_001	Banana	cytosol, peroxisome, plasma membrane	27.24	21.95
GSMUA_Achr6P33280_001	Banana	cytosol, peroxisome, plasma membrane	27.07	17.13
GSMUA_Achr6P08820_001	Banana	plasma membrane	27.59	12.7

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	InterPro:ABC_2_trans	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr8G34440_001	EnsemblPlants:GSMUA_Achr8P34440_001	EnsemblPlants:GSMUA_Achr8T34440_001
InterPro:IPR003439	UniProt:M0TW46	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000296F0F4
SEG:seg	:	:	:	:	:

Description

ABC transporter G family member 22 [Source:GMGC_GENE;Acc:GSMUA_Achr8G34440_001]

Coordinates

chr8:+:35357655..35359912

Molecular Weight (calculated)

64047.8 Da

IEP (calculated)

9.410

GRAVY (calculated)

0.136

Length

569 amino acids

Sequence
(BLAST)

001: MGPSGGGKTT LLNLLSGKMT IKDHGGLITY NDQPYSKWLK RRIGFVLQDD VVFPNLTVRE TLTYAALLRL PKTLTKQQKE ERAINVIHDL GLERCQDTII
101: GGAYTRGISG GERKRVCIGN EILLDPSLLF LDEPTSGLDS TTALRIAQML HNIALAGKTV VTTIHQPSSR LFNMFDKLIL LGRGSSLYFG KTSEAMLYFS
201: SIGCSPLIPM NPAEFLIDLA NGNINDKSVP LELQQRRFLC KTPEIEGRSS SSMDIHEYLV GAYETRVAGI EKQKLLKPAP IDTMWMMQGR GPCSLDESRV
301: GWWEQCHILF WRGLKERRHE YLSCIRVIQV VATAVIIGLL WWHSDASTPK NLQDQAGLLF FISVFWGYFP VFAAIFTFPK EREILAKERS VGMYKLSAYF
401: IARTTSDLPL DLTLPIVFLL IVYFMAGLRS DFTTFLESLL TIFLSIVAAQ GLGLAVGAAL MDIKKATTLA SVIIMTFMLS GGFFVQRVPF FMSWIRHLSF
501: NYHAYRLLLQ AQYGCTSTSH HNANPCKSRF IEELGLDNRG MEVGTMIAMV FGYRLLAYLF LRKMKLRNT

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.