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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46506 Canola cytosol, peroxisome, plasma membrane 95.18 97.6
Bra026514.1-P Field mustard cytosol, peroxisome, plasma membrane 95.04 97.46
AT3G25620.2 Thale cress cytosol, nucleus, plasma membrane, plastid 88.47 90.18
CDY51602 Canola plastid 86.72 89.19
CDY48079 Canola plastid 86.57 89.17
VIT_01s0011g02730.t01 Wine grape cytosol, peroxisome, plasma membrane 66.28 67.16
Solyc04g006960.2.1 Tomato cytosol, nucleus, peroxisome 65.99 66.96
PGSC0003DMT400019318 Potato cytosol, nucleus, peroxisome 65.55 66.52
KRH34780 Soybean cytosol, peroxisome, plasma membrane 64.09 64.18
KRG92003 Soybean cytosol 63.8 64.08
KRH75541 Soybean cytosol, peroxisome, plasma membrane, plastid 62.63 63.27
KRH71117 Soybean cytosol, peroxisome, plasma membrane, plastid 62.92 63.01
KRH37571 Soybean cytosol, peroxisome, plasma membrane, plastid 56.93 62.6
CDY50951 Canola cytosol, peroxisome, plastid 54.89 58.66
CDY47690 Canola cytosol, peroxisome, plastid 54.89 58.66
CDY49155 Canola cytosol, peroxisome, plasma membrane 55.18 58.24
CDX89252 Canola cytosol, peroxisome, plasma membrane 50.66 54.39
CDY29304 Canola cytosol, peroxisome, plasma membrane 50.51 54.23
CDY29837 Canola plasma membrane 50.8 54.04
CDX92829 Canola plasma membrane 50.8 54.04
CDY12299 Canola cytosol, peroxisome, plasma membrane 55.04 52.95
CDY12359 Canola cytosol, nucleus, plasma membrane 23.07 52.49
CDY36670 Canola cytosol 24.82 46.83
CDX68292 Canola cytosol, peroxisome, plasma membrane 44.38 46.77
CDX96366 Canola cytosol 24.82 46.07
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 45.26 45.32
CDX72849 Canola cytosol, peroxisome, plasma membrane 44.96 45.16
CDY03668 Canola plasma membrane 45.11 45.04
CDY36671 Canola plasma membrane 21.46 42.49
CDY23205 Canola plastid 44.09 41.09
CDX96365 Canola plasma membrane 22.92 40.67
CDX70095 Canola plastid 42.34 40.22
CDY04991 Canola plastid 41.9 39.97
CDX95330 Canola plastid 42.92 39.84
CDY14079 Canola plasma membrane 42.04 38.3
CDX98933 Canola plasma membrane 42.19 38.28
CDY43362 Canola cytosol, peroxisome, plasma membrane 37.23 37.44
CDY24203 Canola peroxisome 37.08 37.3
CDX76121 Canola cytosol 20.44 29.72
CDX93119 Canola cytosol, peroxisome, plasma membrane 25.84 29.26
CDX89610 Canola cytosol, peroxisome, plasma membrane 25.84 29.26
CDY59400 Canola cytosol, plasma membrane, plastid 24.38 28.4
CDY02516 Canola cytosol, peroxisome, plasma membrane 24.38 28.4
CDX92533 Canola plastid 25.99 28.3
CDY13996 Canola plasma membrane 19.71 28.18
CDX94418 Canola plastid 23.36 27.92
CDX89396 Canola plasma membrane 23.07 27.57
CDY27043 Canola plastid 23.21 26.99
CDY50899 Canola cytosol 12.99 26.73
CDX96159 Canola plastid 22.92 26.66
CDY02907 Canola cytosol, peroxisome, plasma membrane 24.67 26.61
CDX74853 Canola plastid 23.65 26.26
CDX69629 Canola plastid 27.59 25.96
CDX67624 Canola cytosol, peroxisome, plasma membrane 26.72 25.88
CDY40201 Canola cytosol 26.57 25.71
CDX76119 Canola cytosol, peroxisome, plasma membrane 24.67 25.34
CDY09810 Canola plastid 27.59 25.13
CDY65003 Canola cytosol, peroxisome, plasma membrane 26.13 25.07
CDY37656 Canola cytosol, peroxisome, plasma membrane 25.99 24.96
CDX73549 Canola cytosol, peroxisome, plasma membrane 27.3 24.74
CDY37372 Canola cytosol, peroxisome, plasma membrane 26.42 24.69
CDY40385 Canola cytosol, peroxisome, plasma membrane 26.42 24.56
CDY18451 Canola cytosol, peroxisome, plasma membrane 25.69 23.72
CDX93388 Canola plasma membrane 25.4 23.48
CDX73404 Canola plasma membrane 27.01 23.45
CDY44641 Canola plasma membrane 7.88 18.18
CDX76122 Canola plasma membrane 25.11 13.42
CDY02906 Canola plasma membrane 25.11 13.39
Protein Annotations
MapMan:11.4.4.1MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078EG22InterPro:AAA+_ATPaseInterPro:ABC_2_trans
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX99764ProteinID:CDX99764ProteinID:CDX99764.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00108423001InterPro:IPR003439InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF01061ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF303
SMART:SM00382SUPFAM:SSF52540TMHMM:TMhelixUniParc:UPI0004EEB1CDSEG:seg:
Description
BnaC02g35560D
Coordinates
chrLK031913:+:989799..993074
Molecular Weight (calculated)
76468.0 Da
IEP (calculated)
9.257
GRAVY (calculated)
0.020
Length
685 amino acids
Sequence
(BLAST)
001: MPPNKQESSF PIIPGESRNE TIPVQETWFS SPSHVIPCLD DDGPSHQSRQ SSVLRQSLRP IILKFEELTY TIKIQSGKGS YWFGSQEPKQ NRLILNGVSG
101: IVKPGDLLAM LGPSGSGKTT LVTALAGRLQ GKLSGTVSYN GAPFTSSMKR RTGFVTQEDV LYPHLTVMET LTYTALLRLP KELTRKEKIQ QAESVISDLG
201: LTRCCNSVIG GGLIRGISGG ERKRVSIGQE MLVNPSLLLL DEPTSGLDST TAARIVATLR SLARGGRTVV TTIHQPSSRL YRMFDKVLVL SDGSPIYSGD
301: SGRVMEYFGS IGFQPGSSFV NPADFVLDLA NGITSDTNQY EQGEINGKLD RLEEQNSVKE SLISAYKKNL YPPLKEEFSR TFPQDQTVNW SRSKTRLTSK
401: TYSCSNDVST LGSHIDRWPT SWWMQFSVLL KRGLKERSHE SFSGLRIFMV MSVSLLSGLL WWHSRVAHIQ DQVGLLFFFS IFWGFLPLFN AIFTFPQERP
501: MLIKERSSGI YRLSSYYTAR TVGDLPMELI LPTIFVTITY WMGGLKSSLT TFIMTLMIVL YNVLVSQGVG LALGAILMDA KKAATLSSVL MLVFLLAGGY
601: YIQHIPGFIA WLKYISFSHY CYKLLVGVQY TWDEVYECGP GLHCGVMDYE GIKNLSLGNM MWDVLALTLM LLLYRFLAYV ALRNL
Best Arabidopsis Sequence Match ( AT3G25620.2 )
(BLAST)
001: MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR QSLRPIILKF EELTYSIKSQ TGKGSYWFGS QEPKPNRLVL
101: KCVSGIVKPG ELLAMLGPSG SGKTTLVTAL AGRLQGKLSG TVSYNGEPFT SSVKRKTGFV TQDDVLYPHL TVMETLTYTA LLRLPKELTR KEKLEQVEMV
201: VSDLGLTRCC NSVIGGGLIR GISGGERKRV SIGQEMLVNP SLLLLDEPTS GLDSTTAARI VATLRSLARG GRTVVTTIHQ PSSRLYRMFD KVLVLSEGCP
301: IYSGDSGRVM EYFGSIGYQP GSSFVNPADF VLDLANGITS DTKQYDQIET NGRLDRLEEQ NSVKQSLISS YKKNLYPPLK EEVSRTFPQD QTNARLRKKA
401: ITNRWPTSWW MQFSVLLKRG LKERSHESFS GLRIFMVMSV SLLSGLLWWH SRVAHLQDQV GLLFFFSIFW GFFPLFNAIF TFPQERPMLI KERSSGIYRL
501: SSYYIARTVG DLPMELILPT IFVTITYWMG GLKPSLTTFI MTLMIVLYNV LVAQGVGLAL GAILMDAKKA ATLSSVLMLV FLLAGGYYIQ HIPGFIAWLK
601: YVSFSHYCYK LLVGVQYTWD EVYECGSGLH CSVMDYEGIK NLRIGNMMWD VLALAVMLLL YRVLAYLALR NL
Arabidopsis Description
ABCG21ABC transporter G family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA72]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.