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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29837 Canola plasma membrane 98.45 98.45
CDY29304 Canola cytosol, peroxisome, plasma membrane 90.53 91.38
CDX89252 Canola cytosol, peroxisome, plasma membrane 90.53 91.38
AT4G27420.1 Thale cress cytosol, peroxisome, plasma membrane 81.99 82.76
VIT_19s0014g03280.t01 Wine grape cytosol, peroxisome, plasma membrane 63.51 65.65
PGSC0003DMT400039671 Potato plasma membrane 54.97 63.67
PGSC0003DMT400049667 Potato cytosol, peroxisome, plasma membrane 59.32 62.32
Solyc07g063400.2.1 Tomato cytosol, peroxisome, plasma membrane 59.01 61.99
Solyc12g013630.1.1 Tomato cytosol, peroxisome, plasma membrane 59.47 60.99
Solyc12g013640.1.1 Tomato cytosol, peroxisome, plasma membrane 57.92 59.21
PGSC0003DMT400039676 Potato plasma membrane 57.61 58.98
GSMUA_Achr1P08870_001 Banana cytosol, peroxisome, plasma membrane 54.81 57.4
GSMUA_Achr2P02720_001 Banana mitochondrion 50.93 55.13
CDY47690 Canola cytosol, peroxisome, plastid 53.26 53.51
CDY50951 Canola cytosol, peroxisome, plastid 52.95 53.2
CDY51602 Canola plastid 54.5 52.7
CDY46506 Canola cytosol, peroxisome, plasma membrane 54.5 52.54
CDY48079 Canola plastid 54.04 52.33
CDY49155 Canola cytosol, peroxisome, plasma membrane 52.48 52.08
CDX99764 Canola cytosol, peroxisome, plasma membrane 54.04 50.8
KRH20507 Soybean cytosol 49.07 50.24
CDY12359 Canola cytosol, nucleus, plasma membrane 22.36 47.84
CDX68292 Canola cytosol, peroxisome, plasma membrane 48.14 47.69
CDY36670 Canola cytosol 26.86 47.66
CDY12299 Canola cytosol, peroxisome, plasma membrane 52.64 47.61
CDX96366 Canola cytosol 26.71 46.61
CDX82199 Canola cytosol, peroxisome, plasma membrane, plastid 48.6 45.76
CDX72849 Canola cytosol, peroxisome, plasma membrane 47.98 45.31
CDY03668 Canola plasma membrane 48.14 45.19
CDY36671 Canola plasma membrane 23.29 43.35
CDX70095 Canola plastid 46.89 41.89
CDY04991 Canola plastid 46.27 41.5
CDX96365 Canola plasma membrane 24.69 41.19
CDY23205 Canola plastid 46.89 41.09
CDX95330 Canola plastid 46.43 40.51
CDY14079 Canola plasma membrane 47.2 40.43
CDX98933 Canola plasma membrane 47.05 40.13
CDY24203 Canola peroxisome 39.75 37.59
CDY43362 Canola cytosol, peroxisome, plasma membrane 39.75 37.59
CDX76121 Canola cytosol 22.83 31.21
CDX93119 Canola cytosol, peroxisome, plasma membrane 27.48 29.26
CDX89610 Canola cytosol, peroxisome, plasma membrane 27.33 29.09
CDX92533 Canola plastid 27.33 27.98
CDX94418 Canola plastid 24.38 27.4
CDY13996 Canola plasma membrane 20.19 27.14
CDX89396 Canola plasma membrane 23.91 26.88
CDY02516 Canola cytosol, peroxisome, plasma membrane 24.53 26.87
CDY02907 Canola cytosol, peroxisome, plasma membrane 26.4 26.77
CDY59400 Canola cytosol, plasma membrane, plastid 24.38 26.7
CDX96159 Canola plastid 24.38 26.66
CDY50899 Canola cytosol 13.66 26.43
CDX74853 Canola plastid 25.31 26.42
CDY27043 Canola plastid 24.07 26.32
CDX69629 Canola plastid 29.35 25.96
CDX76119 Canola cytosol, peroxisome, plasma membrane 26.86 25.94
CDX67624 Canola cytosol, peroxisome, plasma membrane 28.26 25.74
CDY09810 Canola plastid 29.35 25.13
CDY40201 Canola cytosol 27.48 25.0
CDY65003 Canola cytosol, peroxisome, plasma membrane 27.33 24.65
CDY37656 Canola cytosol, peroxisome, plasma membrane 26.86 24.26
CDX73549 Canola cytosol, peroxisome, plasma membrane 27.64 23.55
CDX73404 Canola plasma membrane 28.42 23.19
CDX93388 Canola plasma membrane 26.4 22.94
CDY37372 Canola cytosol, peroxisome, plasma membrane 25.78 22.65
CDY18451 Canola cytosol, peroxisome, plasma membrane 26.09 22.64
CDY40385 Canola cytosol, peroxisome, plasma membrane 25.78 22.52
CDY44641 Canola plasma membrane 8.54 18.52
CDY02906 Canola plasma membrane 28.26 14.16
CDX76122 Canola plasma membrane 28.11 14.12
Protein Annotations
MapMan:24.1.3.2.2Gene3D:3.40.50.300GO:A0A078DWK4InterPro:AAA+_ATPaseInterPro:ABC_2_transInterPro:ABC_transporter-like
InterPro:ABC_transporter_CSEnsemblPlants:CDX92829ProteinID:CDX92829ProteinID:CDX92829.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016787
GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00154662001InterPro:IPR003439InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF01061
ScanProsite:PS00211PFscan:PS50893PANTHER:PTHR19241PANTHER:PTHR19241:SF257SMART:SM00382SUPFAM:SSF52540
TMHMM:TMhelixUniParc:UPI0004EC6C59SEG:seg:::
Description
BnaC07g40870D
Coordinates
chrLK031873:-:994411..997019
Molecular Weight (calculated)
71626.4 Da
IEP (calculated)
9.506
GRAVY (calculated)
0.060
Length
644 amino acids
Sequence
(BLAST)
001: MHRSILGMDN QEVIDIEAQI ENNNDDQTLP FSIFKKANLP ITLKFENVVY TVKVKEPKSW LGQTKGKTED KTILKGVNGI VKPGEILAML GPSGSGKTSL
101: LTALGGRVSE GKGKLTGNIS YNNKPFSKGV KRATGFVTQD DALYPHLTVT ETLVFTALLR LPNSFKKQDK IKQAEAVVTE LGLDRCKNTI IGGPFLRGVS
201: GGERKRVSIG QEILINPSLL FLDEPTSGLD STTAQRIVSV LWELARGGRT VVTTIHQPSS RLFYMFDKIL LLSEGNPIYF GLGSNAMDYF ASVGYSPSVE
301: RVNPSDFLLD IANGIGSDES QRPEALKTAL VAVYKTNLLD NVINDLKGHD DHYNQSVESL GDSKRFGDWP TTWWQQFCVL SKRGLKQRRH DSFSGLKIGQ
401: VLFVSLLCGL LWWKTDLAHL QDQLGLLFFM SSFWAFFPLF QQIFTFPQER KMLEKERSSG MYRLSSYFMS RVVGDLPMEL ILPTIFLIIT YWMAGLNPKP
501: VNFFLTLLTL LLHVLVSGGL GLALGALVMD QKTATTLGSV IMLTFLLAGG FYVRNVPVFI SWIKYVSIGY YTYKLVILGQ YTESEWYPCG ENGKMKCYVG
601: DFEGIKHIGF HGGLVSAFAL ALMLVGYRVV AYIALMRIGK TKSG
Best Arabidopsis Sequence Match ( AT4G27420.1 )
(BLAST)
001: MDNQEVSMDV ETPIAKTNDD RSLPFSIFKK ANNPVTLKFE NLVYTVKLKD SQGCFGKNDK TEERTILKGL TGIVKPGEIL AMLGPSGSGK TSLLTALGGR
101: VGEGKGKLTG NISYNNKPLS KAVKRTTGFV TQDDALYPNL TVTETLVFTA LLRLPNSFKK QEKIKQAKAV MTELGLDRCK DTIIGGPFLR GVSGGERKRV
201: SIGQEILINP SLLFLDEPTS GLDSTTAQRI VSILWELARG GRTVVTTIHQ PSSRLFYMFD KLLLLSEGNP VYFGLGSNAM DYFASVGYSP LVERINPSDF
301: LLDIANGVGS DESQRPEAMK AALVAFYKTN LLDSVINEVK GQDDLCNKPR ESSRVATNTY GDWPTTWWQQ FCVLLKRGLK QRRHDSFSGM KVAQIFIVSF
401: LCGLLWWQTK ISRLQDQIGL LFFISSFWAF FPLFQQIFTF PQERAMLQKE RSSGMYRLSP YFLSRVVGDL PMELILPTCF LVITYWMAGL NHNLANFFVT
501: LLVLLVHVLV SGGLGLALGA LVMDQKSATT LGSVIMLTFL LAGGYYVQHV PVFISWIKYV SIGYYTYKLL ILGQYTANEL YPCGDNGKLR CHVGDFEGIK
601: HIGFNSGLVS ALALTAMLVV YRVIAYIALT RIGKTKSG
Arabidopsis Description
ABCG9ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.