Factsheet for Zm00001d027723_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92832	Sorghum	plasma membrane	92.83	91.61
TraesCS4D01G271500.1	Wheat	plastid	84.99	85.11
HORVU4Hr1G072620.1	Barley	plastid	85.26	84.81
TraesCS4A01G032900.1	Wheat	plastid	85.66	84.65
TraesCS4B01G272400.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	85.26	84.47
Os03t0157400-01	Rice	cytosol, peroxisome, plasma membrane	85.52	83.53
GSMUA_Achr8P04700_001	Banana	cytosol, peroxisome, plasma membrane, plastid	72.51	73.39
KRH72054	Soybean	cytosol, peroxisome, plasma membrane, plastid	68.79	69.72
KRH32924	Soybean	cytosol, peroxisome, plasma membrane, plastid	68.26	69.65
Solyc01g006720.2.1	Tomato	plastid	66.53	69.2
PGSC0003DMT400054994	Potato	plastid	66.4	68.87
VIT_08s0032g00790.t01	Wine grape	plastid	68.26	68.72
KRH68048	Soybean	plastid	67.2	68.38
CDX70095	Canola	plastid	65.47	68.38
GSMUA_Achr6P23160_001	Banana	plastid	66.67	68.3
KRG96304	Soybean	cytosol, peroxisome, plasma membrane, plastid	66.67	68.21
GSMUA_Achr1P04620_001	Banana	cytosol, peroxisome, plasma membrane, plastid	64.41	67.83
CDY04991	Canola	plastid	64.67	67.83
AT5G06530.1	Thale cress	plasma membrane	67.33	67.51
CDX98933	Canola	plasma membrane	66.67	66.49
CDY14079	Canola	plasma membrane	66.4	66.49
Bra009203.1-P	Field mustard	plasma membrane	66.4	66.23
Bra028729.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.34	65.43
CDY23205	Canola	plastid	62.02	63.54
CDX95330	Canola	plastid	61.49	62.74
Zm00001d004762_P001	Maize	plasma membrane	36.79	43.83
Zm00001d053049_P001	Maize	plasma membrane	36.79	43.55
Zm00001d046537_P002	Maize	nucleus, peroxisome, plasma membrane	38.38	42.75
Bra033441.1-P	Field mustard	plastid	60.42	40.19
Zm00001d024497_P001	Maize	plastid	38.25	39.61
Zm00001d011006_P001	Maize	cytosol, peroxisome, vacuole	25.5	26.97
Zm00001d008512_P002	Maize	golgi, plasma membrane, vacuole	24.44	26.47
Zm00001d035553_P001	Maize	plasma membrane	25.1	26.47
Zm00001d044895_P001	Maize	cytosol, peroxisome, plasma membrane	21.51	26.21
Zm00001d044476_P001	Maize	cytosol, peroxisome, plasma membrane	20.98	25.94
Zm00001d012438_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	24.97	25.3
Zm00001d011350_P001	Maize	cytosol, peroxisome, plasma membrane	17.0	25.25
Zm00001d042953_P001	Maize	plasma membrane	25.23	24.97
Zm00001d038068_P001	Maize	cytosol, peroxisome, plasma membrane	22.44	24.35
Zm00001d028689_P001	Maize	cytosol, peroxisome, plasma membrane	25.1	23.92
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	23.24	23.71
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	8.1	22.18
Zm00001d026706_P005	Maize	plasma membrane	22.05	22.13
Zm00001d024075_P001	Maize	cytosol	24.57	20.74

Protein Annotations

EntrezGene:100216600	MapMan:24.1.3.2.2	Gene3D:3.40.50.300	UniProt:A0A1D6JP08	InterPro:AAA+_ATPase	InterPro:ABC_2_trans
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950
GO:GO:0008150	GO:GO:0009414	GO:GO:0009628	GO:GO:0010148	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	ProteinID:ONL93760.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF286	SMART:SM00382
SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0004DEC1DE	EnsemblPlantsGene:Zm00001d027723	EnsemblPlants:Zm00001d027723_P002	EnsemblPlants:Zm00001d027723_T002
SEG:seg	:	:	:	:	:

Description

ABC-2 type transporter family protein

Coordinates

chr1:-:12176198..12182441

Molecular Weight (calculated)

82369.8 Da

IEP (calculated)

9.299

GRAVY (calculated)

0.040

Length

753 amino acids

Sequence
(BLAST)

001: MESTMEKPAV MDAARGGGGV GRAKSDHLAP SLSLSRTASA ETVLGTAADA AKPAGFGRKR RSASVGGGNN NSHIRKSRSA QLKLDVEDLV SSGAALSRAS
101: SASLGFSFTF TGFTPPLQHM CSADPPSFSD DENPVDIEAG TRRKKLVTEP TLPIYLKFAE VKYRVAGKGS PREILGGISG SASPGEVLAL MGPSGSGKTT
201: LLSILGGRAA AGGAVDGCIS YNDEPFSKSL KRRIGFVTQD DVLFAHLTVK ETLTYAALLR LPRTMTQQQK KERAMDIIHE LGLERCQDTM IGGSFVRGVS
301: GGERKRVCIG NEILINPSLL FLDEPTSGLD STTALRIVQL LHDIAEDGKT VITTIHQPSS RLFHKFDKLI LLGKGSLLYF GKASEAMPYF QSIGCAPLIA
401: MNPAEFLLDL ANGNTTDVSV PSELDDKVHM ENHNLENNNS KIDYRPSAQD VHEYLVDAYE TRVAFKEKKK LLAPLPISDD LKATITSSKR EWGTSWWQQY
501: SILFCRGIKE RRHDYLSWMR ITQVIATSVI LGLLWWHSDP STLKGLEDQA GLLFFIAVFW GFFPVFTAIF TFPQERAMLN KERAVDMYKL SAYFLARTTS
601: DLPLDLFLPI IFMVIVYFMA GLKATATHFF LSMLTVFLSI IAAQGLGLAI GATLLDIKKA TTLASVTVMT FMLAGGFFVK SVPPFISWLR YLSFNYHTYR
701: LLLKVQYDPV PDILTTTRHM DSGGTEVAAL VAMVIGYRVL AYLSLRRAKA LGS

Best Arabidopsis Sequence Match ( AT5G06530.2 )
(BLAST)

001: MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR
101: ASSASLGLSF SFTGFAMPPE EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL TGISGSVNPG EVLALMGPSG
201: SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV
301: RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGCS
401: PLIAMNPAEF LLDLANGNIN DISVPSELDD RVQVGNSGRE TQTGKPSPAA VHEYLVEAYE TRVAEQEKKK LLDPVPLDEE AKAKSTRLKR QWGTCWWEQY
501: CILFCRGLKE RRHEYFSWLR VTQVLSTAVI LGLLWWQSDI RTPMGLQDQA GLLFFIAVFW GFFPVFTAIF AFPQERAMLN KERAADMYRL SAYFLARTTS
601: DLPLDFILPS LFLLVVYFMT GLRISPYPFF LSMLTVFLCI IAAQGLGLAI GAILMDLKKA TTLASVTVMT FMLAGGFFVK KVPVFISWIR YLSFNYHTYK
701: LLLKVQYQDF AVSINGMRID NGLTEVAALV VMIFGYRLLA YLSLRQMKIV T

Arabidopsis Description

ABCG22ABC transporter G family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93YS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.